Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03170 ATGGAAAAGGAGAACCCTTCTTTGGGTCCATTCTCCAACAAGTCTCTATCTGCTCCCTCTGGTGACACCCTCGCTCTAATTATCAATCAGAAGGATGAAAGCACCATGAAAACCCCTTGGCAAGTGTTGGATGAACTCCGTGATGAAAGTAGTGATGACGGTGAAAATGACGTTGGTGGTGGGAGTGGTAATCACAGAAGAGGGAAGAGTGGTGTTGGTGGTGGAAGTGGTGACCATAATAACAATGGAGTTCGTGGCCGGATTGGTGGTGAGAATGATAATGGTGGTGAGAATGGTAATGGGGTTCCTCCGGTGGCTGTGGCGGTGGCTGTGGCAGTGGGTGGTGGTGGTGGTGGTAAGGTGGAGCTGGTGGAGAGTGGTGTTGTGAAGGAGGGAATGATGGGGAAAAAGAGAAAGACTTCTATAGTGAGGGACCCTCCCTCTGGGAAACCTACTTGTCCTCTTTGCCTCAAACAGTTTCCAACATGGAAGGGTGCGTTTGGCCACATGCGGGCACACCCTGATCGTGATTATCGTGGTTTCTTCAAACCTCCTGTGTTTGGATCTCCATCCTCAACCCAACACGATACCCTTAACAAGGGTAACACCTCACAGAGTAAGAAAAATAAAACAAAATAA 639 0.4883 MEKENPSLGPFSNKSLSAPSGDTLALIINQKDESTMKTPWQVLDELRDESSDDGENDVGGGSGNHRRGKSGVGGGSGDHNNNGVRGRIGGENDNGGENGNGVPPVAVAVAVAVGGGGGGKVELVESGVVKEGMMGKKRKTSIVRDPPSGKPTCPLCLKQFPTWKGAFGHMRAHPDRDYRGFFKPPVFGSPSSTQHDTLNKGNTSQSKKNKTK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03170 212 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Vimu7g03170 212 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 136 202 - -
Vimu7g03170 212 MobiDBLite consensus disorder prediction 1 101 - -
Vimu7g03170 212 MobiDBLite consensus disorder prediction 187 206 - -
Vimu7g03170 212 MobiDBLite consensus disorder prediction 8 37 - -
Vimu7g03170 212 MobiDBLite consensus disorder prediction 181 212 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03170 145 200 C2H2 Transcription Factor Family AT4G35280 41.379 2.08e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vimu7g03170 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03170 - - pvu:PHAVU_002G115500g 252.292