Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03158 ATGGCTTGTCTTAGCCGCCACCACCACCGCGCCTGGCTCACTACCCAAGACATGCTTCAACGCTGCCCTCTCTCCGCTCACCACCGCCTTCTCCACGACGACGCCGACTCAAACCCCATTAACGTCCCCTCTCTCTCCTCCGCCTACCGTCTCTTCCCCGTCTACGCCATGGGCGCCCTCGACCCCACACCCGAACCCGAATTGGACGGACCCGATCCTATTTGGAACGCTGTCAGAGAGGAGGCAAAGCTCGAGGCCGAGAAGGAGCCGATTTTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCACGATTGCTTCGAACAAGCATTGGCCTTTGTCGTCGCCAACCGTCTCCAAAACGCTACTCTCTTGGCCACTCAGCTCATGGATATTTTCTGCAATGTCATTCTGCATGACAAACCTATCCAACGATCCATTCGCCTTGATGTTCAGGTCTCTCTCTCTCTCTCTCTCACACACACACACACACCTTATTACTTACATTTTTAG 510 0.5412 MACLSRHHHRAWLTTQDMLQRCPLSAHHRLLHDDADSNPINVPSLSSAYRLFPVYAMGALDPTPEPELDGPDPIWNAVREEAKLEAEKEPILSSFLYASILAHDCFEQALAFVVANRLQNATLLATQLMDIFCNVILHDKPIQRSIRLDVQVSLSLSLTHTHTPYYLHF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03158 169 Gene3D serine acetyltransferase, domain 1 61 155 IPR042122 -
Vimu7g03158 169 PANTHER SERINE ACETYLTRANSFERASE 69 152 - -
Vimu7g03158 169 SMART SATase_N_2_a 74 152 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vimu7g03158 169 Pfam Serine acetyltransferase, N-terminal 74 151 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03158 Vimu-Chr7 26744478 26748929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03158 52 151 Miscellaneous Gene Families AT2G17640 69.608 2.01e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03158 K00640 - gmx:100775449 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03158 7 26744478 26748929 Vimu7g03158 7 26744478 26748929 ECH
Vimu7g03158 7 26744478 26748929 Vimu7g03158 7 26744478 26748929 PCT
Vimu7g03158 7 26744478 26748929 Vimu7g03453 7 29166566 29172992 PCT