Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03143 ATGCTGCATTTCAACATGTCTAAATCCACAAACTCTGTTTTTAAATCTTTCCATACACTTCATACATATATATCTTTAATGGCATCCCTTGATGGTCAGAAAAGTAATGAAACTCCACCGAATCATGTTGAGATTCCTGTGGGTGCAGTTGGTGTGGAGCCAAAAGCAAACCGAGAAATCCTTGAAGAGAAAAACATAGACTATTCCCAGAGGGCGAATTGGGTGCGTGCAGCAGTGTTAGGAGCGAACGATGGTTTAGTCTCGGTTGCATCATTGATGATGGGTGTTGGAGCTGTAAAGGAGCAGATGGCAGCGATGCTTCTTGCTGGTTTTGCAGGGTTAATTGCGGGGGCATGCAGCATGGCGATTGGAGAGTTTGTGTCTGTGTACACTCAGTATGACATAGAAATAGCTCAAATGAAAAGAGAGAGAGAAAACAAGAGTATTGGTGATGGAGTGAGTGAAGAAGCTGAAAGGGAAAAGTTACCAAATCCATTTCAGGCTGCTGTAGCATCAGCTCTAGCATTTTCTGTGGGTGCAGTGGTGCCGCTGCTGTCTGCAGCATTCATAAAAAACCATAAAATAAGACTTGGTGTTCTTGTTACGGTGGCTAGTCTGACATTGGTGGTGTTTGGTGGGTTAGGAGCAGTGGTCGGAAAAACTCCGATCACAAAATCTTGCTTTAGAGTGCTGATCGGAGGTTGGATGGCTATGACTGTAACATTTGGTTTCACCAAGTTATTTGCCTTTACTGGGATTTGA 762 0.437 MLHFNMSKSTNSVFKSFHTLHTYISLMASLDGQKSNETPPNHVEIPVGAVGVEPKANREILEEKNIDYSQRANWVRAAVLGANDGLVSVASLMMGVGAVKEQMAAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQMKRERENKSIGDGVSEEAEREKLPNPFQAAVASALAFSVGAVVPLLSAAFIKNHKIRLGVLVTVASLTLVVFGGLGAVVGKTPITKSCFRVLIGGWMAMTVTFGFTKLFAFTGI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03143 253 CDD Nodulin-21 74 222 - -
Vimu7g03143 253 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 62 248 IPR008217 GO:0005384|GO:0030026
Vimu7g03143 253 Pfam VIT family 158 245 IPR008217 GO:0005384|GO:0030026
Vimu7g03143 253 Pfam VIT family 75 147 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03143 Vimu-Chr7 26628502 26629441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03143 62 253 Nodulin-like Gene Family AT3G43660 64.583 1.38e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03143 K22736 - gmx:100817158 310.842