Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03123 ATGACGACGACGACGACAGCAACAACCTTTGATGTCTCCGCCGCTTGTTTTCGTGTTCCTCCGTCGTCTTCTCCTCGTTTCTCACGCAATCCATGCCACACCAGGTTTTCAGTTCTGAATTCCTTGAATCCTCACAGGGGACGGATAAGCGTGAACGTTCCACCCAAGTTTCCAAACTTCCGGAGGGAAGTTGCACTGAAGGGAGATTTGGAGGCTGTTGTTCCAACTTCGGTGCCTGTGCGTGTTGCATATGAACTTCTTCTAGCTGGTCATCGATATTTGGATGTGAGGACCCCAGAAGAGTTTGATGAAGGACACGTTCCTGGCGCAATAAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACGAAGAACGGCAACTTCATTAGAGAGGTGTCCTCACATTTTAGGAAGGACGATGAAATTATAGTTGGGTGCCAGCTTGGTAAAAGATCTATCATGGCTGCGAGTGACTTGCTAGCTGCTGGGTTCACAGGACTGACAGACATGGCTGGTGGCTTTGCAGCTTGGACACAAAATGGGCTTCCAACAGAACGATGA 564 0.4876 MTTTTTATTFDVSAACFRVPPSSSPRFSRNPCHTRFSVLNSLNPHRGRISVNVPPKFPNFRREVALKGDLEAVVPTSVPVRVAYELLLAGHRYLDVRTPEEFDEGHVPGAINIPYMFRVGSGMTKNGNFIREVSSHFRKDDEIIVGCQLGKRSIMAASDLLAAGFTGLTDMAGGFAAWTQNGLPTER 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03123 187 Gene3D - 66 186 IPR036873 -
Vimu7g03123 187 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 76 186 IPR036873 -
Vimu7g03123 187 SMART rhod_4 77 184 IPR001763 -
Vimu7g03123 187 Pfam Rhodanese-like domain 93 180 IPR001763 -
Vimu7g03123 187 CDD RHOD 94 178 - -
Vimu7g03123 187 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 22 186 - -
Vimu7g03123 187 ProSiteProfiles Rhodanese domain profile. 87 187 IPR001763 -
Vimu7g03123 187 ProSitePatterns Rhodanese signature 1. 102 113 IPR001307 GO:0004792
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03123 Vimu-Chr7 26509949 26511941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03123 77 184 Sulfurtransferasese or Rhodanese AT5G66170 45.455 4.88e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03123 - - gmx:100305968 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03123 7 26509949 26511941 Vimu7g03078 7 26140826 26141812 PCT