Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03110 ATGGGTGCAGTTGATGAGGATTATCTCAAGGAAATAGAGATAGCTCGACGTGAACTTCGTTCTTTCATCACCAACAACAAATGCGCCCCTCTCATGCTTCAACTAGCGTACATCCAAAATGTAGATATAGTGAAGCACAGACTTAAACTTAAGAAGGTTTCATACGCAGACCTTTACCAGCTTGCTGGTGTTGTTGCAATAGAGGTCACTCAGGGTCCAATTATTGACTTTGTTCCTGGCAGAATGGATTCAAATGAATCTCCACGAGTTCAAGCACACTTTCTAAATGGTGAAGAAGACGCACGGAGTTTAAGGAGAAAATTTTCTCGCATGGGACTAAGTGAAGACAAAGACATAGTAGTTCTATGTGGAGGCCACGCTTTGATAAGAGCTATGCATCCAAAAGTAGCAATGAGAGAGACACCTAAGGGTGAGACGCGTGAAGATCGCAGCAAGTTCGAAGAAAGAAAATGGACAAAGGAACCTTTGAAGTTTGATAACTCCTATTTTAAGGAACTACTGAGTAGGGGTGCATCCTTTTCGAGGCTTCCCATGGACTCTGCTTTAGTAGAGGATCAAAGATTTTATCACTATGTTGAACGGTATGCTAAGGATGAGGATATCTTTTTCAAAGAATATGCAATTTCACATAAGAAACTCTCAGAGCTGGGCTTCGATCCCAAAAATCTAAACAATTCCAAGGGACTATATCAGAAGCTAAATCAGCACAGGGGACTCGTAGGAATCGGTATAATATCAGTTGCGGTGGCCGGAATATTAGTTTACTTACATAAGAAGAAGAAAAATCAATTGAAGATTGATCCAAAATTGGAGTTTTAG 840 0.406 MGAVDEDYLKEIEIARRELRSFITNNKCAPLMLQLAYIQNVDIVKHRLKLKKVSYADLYQLAGVVAIEVTQGPIIDFVPGRMDSNESPRVQAHFLNGEEDARSLRRKFSRMGLSEDKDIVVLCGGHALIRAMHPKVAMRETPKGETREDRSKFEERKWTKEPLKFDNSYFKELLSRGASFSRLPMDSALVEDQRFYHYVERYAKDEDIFFKEYAISHKKLSELGFDPKNLNNSKGLYQKLNQHRGLVGIGIISVAVAGILVYLHKKKKNQLKIDPKLEF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03110 279 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PRINTS Haem peroxidase superfamily signature 53 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PRINTS Haem peroxidase superfamily signature 158 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 ProSiteProfiles Plant heme peroxidase family profile. 53 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 Gene3D - 38 96 - -
Vimu7g03110 279 Pfam Peroxidase 37 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 Gene3D Peroxidase, domain 2 97 215 - -
Vimu7g03110 279 SUPERFAMILY Heme-dependent peroxidases 49 232 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PRINTS Plant ascorbate peroxidase signature 201 225 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PRINTS Plant ascorbate peroxidase signature 150 174 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03110 279 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 49 228 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03110 Vimu-Chr7 26412876 26416092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03110 30 224 Peroxidase AT4G31760 29.148 3.21e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03110 K00434 - gmx:112998405 253.832