Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03103 ATGGCTACCATGGTTGCTTTCTTGAACTTGGTCATCATACTTTCAGTAGTCTCTACCGGAAAGTCACTGAGCTTAAACTACTATGAAAATACATGCCCTAAAGTGGAGTGCATTGTTGCCAAGGCAGTGAAGGATGCCACTGCTAAGGACAAAACTGTTCCAGCAGCACTTCTTCGAATGCACTTCCATGATTGTTTCATTCGGGGGTGTGACGCCTCCGTGCTGCTAAATTCAAAAGGAAACAGCAAAGCAGAAAAAGATGGGCCACCAAACGTTTCTTTGCATGCATTCTATGTCATTGATGCAGCAAAGAAAGCATTAGAAGCTGCATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTAGCTCTAGCAGCAAGGGACGCGGTTTTTCTGTCTGGAGGACCTACATGGAATGTTCCTAAAGGAAGAAAGGATGGAAGAACATCTAAGGCCAGTGAAACCATACAGTTACCAGCTCCAACCTTCAACTTATCACAACTGCGGCAAAGCTTCTCTCAGAGAGGACTGTCTGGGGAAGACTTGGTAGCTCTACTTCACAGCTTTAATGCTACACATGATGTTGATCCTTCATTAAATCCGTCATTTGCAGCAAAACTGAAATCAATTTGTCCACTAAAAAATCAGGCAAAAAATGCAGGCACCACTATGGATCCCTCTTCAGCAACTTTTGACAATACATATTACAGGTTGATCCTCCAAAATAAAGGCTTGTTTTCTTCTGATCAAGCTTTGCTCGATAACCCAGATACCAAGAATCTGGTTACGAAGTTTGCCACCTCACAAAAGGCATTTTATCAGGCTTTCGCAAAGTCCATGATCAAAATGAGTAACATCAACGGGGGCCAAGAGGTTAGGAAGGACTGCAGAGTGATCAATTAA 900 0.4344 MATMVAFLNLVIILSVVSTGKSLSLNYYENTCPKVECIVAKAVKDATAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNSKAEKDGPPNVSLHAFYVIDAAKKALEAACPGVVSCADILALAARDAVFLSGGPTWNVPKGRKDGRTSKASETIQLPAPTFNLSQLRQSFSQRGLSGEDLVALLHSFNATHDVDPSLNPSFAAKLKSICPLKNQAKNAGTTMDPSSATFDNTYYRLILQNKGLFSSDQALLDNPDTKNLVTKFATSQKAFYQAFAKSMIKMSNINGGQEVRKDCRVIN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03103 299 ProSiteProfiles Plant heme peroxidase family profile. 22 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 FunFam Peroxidase 158 282 - -
Vimu7g03103 299 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 277 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 237 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PRINTS Plant peroxidase signature 221 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 SUPERFAMILY Heme-dependent peroxidases 23 299 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 PANTHER PEROXIDASE 25-RELATED 12 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 Gene3D - 26 157 - -
Vimu7g03103 299 CDD secretory_peroxidase 23 298 IPR033905 GO:0004601|GO:0042744
Vimu7g03103 299 Pfam Peroxidase 39 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03103 299 FunFam Peroxidase 26 170 - -
Vimu7g03103 299 Gene3D Peroxidase, domain 2 187 285 - -
Vimu7g03103 299 Gene3D - 286 299 - -
Vimu7g03103 299 Gene3D Peroxidase, domain 2 158 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03103 Vimu-Chr7 26339147 26340447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03103 10 298 Peroxidase AT5G42180 63.636 1.85e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03103 K00430 - gmx:102665908 531.561