Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03100 ATGGAAGAAGTGTGGAAAGACATAAATCTTGCTACCTTAAATGAGCAAGTAACACGCTCCACAACAACGCACTCCAACTTGGGAGGAGTAATCCTCCAAGACTTTCTCGCTCGACCCTTCACCATCGATCCACCAAACACCATTCTTTCCTCACAAACTCCCTCCCTCTACGCCGCCCCCTCCTCACCGGCACCACCACTCCTCACGGCTCTCAGCTTGAGCTCACACCCCCACCTCCGTTTCGACCCTCACGCACAAAAACCCTCACACCCCCACCACCCTCCTCCACCTTCCAACCACTCTTGCTTCACCACCCCAACCACCGCCTCCTTAGGCGCCAAAAGATTCGCAGAACCCGATTGCAACCTCGGAGACAGAAGAAACAAGCGCATGATCAAGAACCGCGAGTCTGCTGCACGATCGCGAGCCAGGAAACAGGAAAAATTTACCTTCACCACTTTTCGCTCTCCTTAA 474 0.5359 MEEVWKDINLATLNEQVTRSTTTHSNLGGVILQDFLARPFTIDPPNTILSSQTPSLYAAPSSPAPPLLTALSLSSHPHLRFDPHAQKPSHPHHPPPPSNHSCFTTPTTASLGAKRFAEPDCNLGDRRNKRMIKNRESAARSRARKQEKFTFTTFRSP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03100 157 MobiDBLite consensus disorder prediction 135 157 - -
Vimu7g03100 157 MobiDBLite consensus disorder prediction 52 107 - -
Vimu7g03100 157 Gene3D - 125 150 - -
Vimu7g03100 157 SUPERFAMILY Leucine zipper domain 126 149 IPR046347 GO:0003700|GO:0006355
Vimu7g03100 157 MobiDBLite consensus disorder prediction 135 149 - -
Vimu7g03100 157 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 146 IPR043452 GO:0003700|GO:0045893
Vimu7g03100 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 129 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03100 Vimu-Chr7 26308444 26308917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03100 1 147 bZIP Transcription Factor Family AT4G35900 38.286 1.47e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03100 K14432 - gmx:102660922 124.02