Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03089 ATGCAAAAGCCATTCTGCACTTTGCACCCTCCATTTCATAATCCTCTCTCTGAAATTTATCTCGACGGTGCAATGGCAAAGGCTATAGCTGACGCTGAGTATGTGAAGGAAATTGAGAAGGCTCGTCGTGACCTTCGCGTTCTTATCTCCAGCAGAAACTGTGCTCCTCTCATGCTTCGATTAGCGTGGCATGATGCTGGTACCTATGATGTTAAGACAAGAACAGGAGGCCCCAACGGTTCTATCAGGAATGCAACAGAGTTGAATCACGCAGCAAACAAAGGGCTGGAAACAGCAGTTCTGTTCTGTGAGGACGTGAAGGCCAAACATCCAAAAGTTTCATATGCTGACCTTTACCAGCTAGCTGGTGTTGTTGCAGTAGAGATCACCGGGGGACCAACTATTGACTTTGTTCCAGGAAGAAAAGATTCATTGGAATCTCCAGCAGAAGGCCGTCTTCCAGATGCCAAAGAAGGTGCATCGCATTTAAGGGAAATCTTCTATCGCATGGGGCTAAGTGACAGAGACATAGTGGCTCTATCCGGAGGTCACACTTTGGGAAAGGCACATAGAGATCGTTCTGACTTTGAAGGGCAGTGGACAAAGGACCCTTTCAAATTTGATAACTCATATTTTGTAGAATTACTGAAAGGGGAATCAAAAGATTTATTGAAACTTCCAACAGACAAGGCTCTAGTTGAGGATCCTATGTTTCGGAAGTATGTTGAACTGTATGCAAAGGATGAGGATGCCTTTTTCAAAGATTATGCTACCTCACACAAAAAACTCTCAGAGCTTGGCTTCATTTTGAAGAATCATCGTTCCATATTGGCCAAAGGAATTATAGGATTTGGTATTGCCTTAACTGCAGTGATCTTGGGTTACTTACATGAACTAAACAAAAGAACCAATTGA 915 0.4339 MQKPFCTLHPPFHNPLSEIYLDGAMAKAIADAEYVKEIEKARRDLRVLISSRNCAPLMLRLAWHDAGTYDVKTRTGGPNGSIRNATELNHAANKGLETAVLFCEDVKAKHPKVSYADLYQLAGVVAVEITGGPTIDFVPGRKDSLESPAEGRLPDAKEGASHLREIFYRMGLSDRDIVALSGGHTLGKAHRDRSDFEGQWTKDPFKFDNSYFVELLKGESKDLLKLPTDKALVEDPMFRKYVELYAKDEDAFFKDYATSHKKLSELGFILKNHRSILAKGIIGFGIALTAVILGYLHELNKRTN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03089 304 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Vimu7g03089 304 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 FunFam Cytosolic ascorbate peroxidase 41 159 - -
Vimu7g03089 304 Pfam Peroxidase 44 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 SUPERFAMILY Heme-dependent peroxidases 37 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 30 269 IPR044831 GO:0004601|GO:0034599
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 192 216 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 244 268 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 152 169 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 170 191 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 55 70 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 112 130 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 131 143 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 34 54 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 87 111 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 PRINTS Plant ascorbate peroxidase signature 73 83 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 CDD ascorbate_peroxidase 26 268 - -
Vimu7g03089 304 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vimu7g03089 304 FunFam L-ascorbate peroxidase, cytosolic 154 260 - -
Vimu7g03089 304 Gene3D - 41 267 - -
Vimu7g03089 304 ProSiteProfiles Plant heme peroxidase family profile. 44 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03089 304 Gene3D Peroxidase, domain 2 154 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03089 Vimu-Chr7 26210177 26212092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03089 94 263 Peroxidase AT4G16270 33.649 5.26e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03089 K00434 - gmx:100806101 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03089 7 26210177 26212092 Vimu7g03089 7 26210177 26212092 ECH