Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03078 ATGGCATTTTCGGTGGCCCTGTTACCTCGTTGGTCGGTGTTTCTTCTTTTGCTTTTTTTCTTTTGTAGCACAAGAGCAAAGGTTGTCACCATTGATGTGCGTGCAGCCAAGGATCTTATCCAGACTGGTTCCATTTATCTTGATGTTAGGACGGTGGAAGAATTCTCGAAAGGGTATGTAGATGCAGTTAATATCGTTAACATTCCATACATGTTGAATACACCTAAGGGCAAGGTAATGAATCCAGATTTTGTAAAAGAGGTTTCCTTGGCTTGTAACAAAGAAGATCATATCATTGTGGGTTGTCAAATTGGTGGGAGATCTTTCTATGCAACTGCTGCGCTTCTGTCAGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGCTATGAGGAATGGGTTATAAACAAGTTCCCAGTGAAGATACCAGCAGCCAAAGAGGAGTTATAA 450 0.4156 MAFSVALLPRWSVFLLLLFFFCSTRAKVVTIDVRAAKDLIQTGSIYLDVRTVEEFSKGYVDAVNIVNIPYMLNTPKGKVMNPDFVKEVSLACNKEDHIIVGCQIGGRSFYATAALLSDGFKNVKDMGGGYEEWVINKFPVKIPAAKEEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03078 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 23 146 IPR044684 GO:0003824
Vimu7g03078 149 Gene3D - 21 142 IPR036873 -
Vimu7g03078 149 SMART rhod_4 31 139 IPR001763 -
Vimu7g03078 149 Pfam Rhodanese-like domain 36 134 IPR001763 -
Vimu7g03078 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 25 140 IPR036873 -
Vimu7g03078 149 ProSiteProfiles Rhodanese domain profile. 45 142 IPR001763 -
Vimu7g03078 149 CDD RHOD 36 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03078 Vimu-Chr7 26140826 26141812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03078 23 140 Sulfurtransferasese or Rhodanese AT5G66170 52.941 6.49e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03078 - K15692 gmx:100815122 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03078 7 26140826 26141812 Vimu7g03078 7 26140826 26141812 ECH
Vimu7g03078 7 26140826 26141812 Vimu7g03078 7 26140826 26141812 PCT
Vimu7g03123 7 26509949 26511941 Vimu7g03078 7 26140826 26141812 PCT