Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03024 ATGGATTGGTTCCTAAAATCATCGGAAGCCATGTTCAACCTTAATCCATTCAACATTGCCATCTTAGTCATCCTTCCACTAACAACACTTCTCTTCGTTTTGCTACATCGTACTCGTCGAAGAGCACCGTATCCGCCGGGACCAAAGGGCTTGCCCATCATAGGAAACATGTTGATGATGGACCAGTTAACCCACCGCGGTCTCGCCACCCTCGCCAAGCAATACGGCGGCGTTTTCCACCTCCGCATGGGCTTCCTCCACATGATCGCCATCTCCGACCCCGACGCGGCGCGTCAGGTTCTCCAAGTCCAAGATAATATATTCTCCAATCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCACACTACGGCCCCTTCTGGCGCCAGATGCGCAAGCTCTGCGTCATGAAACTCTTCAGCCGAAAGCGCGCCGAGTCCTGGCAATCCGTGCGGGACGAGGTCGACGCTGCAGTCCGCTCCGTCGCGGCTTCCGCCGGAAAAGCCGTCAACGTCGGCGAGCTCGTGTTCAACCTGACGAAAAACATCATCTACCGCGCGGCCTTTGGGTCGAGCTCGCAGGAGGGGCAGGACGAGTTCATTGGGATTCTGCAGGAGTTTTCGAAACTCTTTGGCGCTTTCAACATCGCTGATTTTATACCCTACCTCGGGCGCGTGGACCCGCAAGGGCTCAACGCGCGCCTTGCTAGGGCTCGCGGCGCGTTGGATAGCTTCATTGATAAGATCATTGATGAGCACGTAGAGAAGAAGAAGAATGAGAAGGGTGTCTGTGATGGAGAAACGGACATGGTGGATGAGTTGCTCGCGTTCTACACCGAAGAGGCCAAGTTGAACAATGAACCCGAAGATTTGCAGAACTCTATCAGACTCACTAAGGATAACATCAAAGCTATCATTATGGATGTGATGTTTGGAGGGACGGAAACCGTGGCATCGGCTATTGAGTGGGCCATGGCGGAGTTAATGAGAAGCCCAGAAGACCAAAAGAGGGTCCAACAAGAGCTGGCGGATGTAGTGGGTCTTGACCGCAGGGTCGAAGAGTCCGATTTTGAGAAACTCACATTCTTAAAATGTGCCCTTAAAGAGACCCTACGCCTCCACCCTCCGATCCCACTCCTCCTCCATGAGACGGCCGAGGAAGCGACGGTCAGCGGCTACTTCGTTCCCAAGAAAGCGCGCGTGATGATCAACGCGTGGGCAATTGGGAGAGACAAAAACTCCTGGGAGGAACCCGAAACATTCAAACCCGCCAGGTTTTTGGAACCGGGCGTGCCCGACTTCAAGGGTAGCAACTTCGAGTTCATTCCTTTCGGGTCGGGTCGCAGGTCCTGCCCCGGGATGCAGTTGGGGCTGTACGCGCTTGAATTGGCGGTGGCTCACCTCCTTCACTGCTTCACGTGGGAATTGCCTGATGGAATGAAACCCAGTGAGTTGGACATGGGTGACATTTTCGGACTCACCGCTCCAAAAGCCACGCGACTCATCGCTGTGCCAACCAAGCGCGTGTTAGATTTGGCGGTGCAAAAGAGTGGCGTGATTTGTTTGTATACGGAAGTGCATGATATTATTATAAGTGAAACTGATGAAAGTTGTATTTCAAAGCGCTAG 1653 0.539 MDWFLKSSEAMFNLNPFNIAILVILPLTTLLFVLLHRTRRRAPYPPGPKGLPIIGNMLMMDQLTHRGLATLAKQYGGVFHLRMGFLHMIAISDPDAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVRSVAASAGKAVNVGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLARARGALDSFIDKIIDEHVEKKKNEKGVCDGETDMVDELLAFYTEEAKLNNEPEDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTFLKCALKETLRLHPPIPLLLHETAEEATVSGYFVPKKARVMINAWAIGRDKNSWEEPETFKPARFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSELDMGDIFGLTAPKATRLIAVPTKRVLDLAVQKSGVICLYTEVHDIIISETDESCISKR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03024 550 PANTHER CYTOCHROME P450 84A1-RELATED 18 518 - -
Vimu7g03024 550 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vimu7g03024 550 Pfam Cytochrome P450 45 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 FunFam Cytochrome P450 84A1 37 515 - -
Vimu7g03024 550 CDD CYP71-like 74 509 - -
Vimu7g03024 550 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03024 550 SUPERFAMILY Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03024 Vimu-Chr7 25483784 25487535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03024 52 518 Monolignol Biosynthesis Gene Families AT4G36220 78.511 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03024 K09755 - gmx:100783430 875.93