Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03017 ATGGAATGGATCATAGGAGTGTGTGTTGTGATGGGCATGTTGTTGATGAGTTGGTGGATTCTACTGTATGGGAAGAATGATGAGAAGACGATGGGAAAAGGCAAAGTCCCAAAAGGAAACTCTGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATAGCTTCTGGCTACACTTCTTCCCCTGTCACCTTCTTGGAAAAACGCAAGTCTTTGTATGGGAATGTGTTCAAGACATGCATTTTGGGGAGCAATGTCATAATATCGACTGACCCGGACGTCAACAAGGTGGTTCTGCAGAACCACCAAGGCAACTTCATCCCTGCTTATCCAAAATCAATTAGAGAATTGATGGGAGAACAATCCATACTCAAAATGAACGGGACCATGCATAAGAAAGTGCACACTCTCATTGCAGGGTTCCTCCGATCCCCACAACTCAAAGCTCGAATCACCAGAGACATTGAACACACTGTCAAACAATGCTTGGCATCTTGGACTTCCCACCAACCAATATACGTTCAAGATCAAGTCAAAAGGATTACATTTCCTGTTTTGGTCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGAATTGGACTTCCTGTATAGAGAGTTTGCAGAATTCATCAAAGGGTTGATTTGCTTACCCCTCAAATTTCCCGGAACAAGACTATATAAATCCTTGAAGTCGAAAGATAGGATGGTGAAGATGGTGAGGAAGATAGTAGAGGAGAGGAAGAAGCTAAAGAAGCTAATGATAGATAATGATGCAGATGACGAAGGTGATGCAGTGAATGATGTATTGGAGGCACTGTTACGAGATAAGGATGACTCCAGCTCAAGCGCACGCCTGAGTCCAGACATGATTAGCCAAAACATCATAGAGATGATGATACCGGGGGAGGAAACACTTCCTACAGCTATGACCATGGCCCTCAAGTTCCTCAGTGACTCTCCTATCGCTCTATCTAAACTTAAGGAGGAGAACATGGAACTGAAGAGACTAAAGACTAATTGCTCAGAAGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAATGTTATCAGTGAAACTCTCAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCGCTCAATGACATAGAAATTAAAGGGTACCTGATTCCGAAGGACTGGTGTGTCATGGCATCTCTTACCTCGGTTCACATGGACGAGAAGAACTATGAAAACCCTTTTAAATTCGATCCATGCAGATGGGAGAAAATTGGAGCTGTGGCTGGTTGCAACAGCTTTGCCCCATTTGGAGGTGGAAATAGACTATGTCCTGGGTTAGAACTCTCCAGGCTCGAGCTCTCTATTTTCCTTCATCATCTTGTTACAACTTACAGGTGGGTGGCTGAGAGGGATGAAATCGTCTACTTTCCAACTGTGAAGATGAAGAGGAAGCTCCCAATTTGGGTGCAACCCATTAGCGCTTGA 1473 0.4386 MEWIIGVCVVMGMLLMSWWILLYGKNDEKTMGKGKVPKGNSGWPLLGETLDFIASGYTSSPVTFLEKRKSLYGNVFKTCILGSNVIISTDPDVNKVVLQNHQGNFIPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPQLKARITRDIEHTVKQCLASWTSHQPIYVQDQVKRITFPVLVKVLMSVGPGEELDFLYREFAEFIKGLICLPLKFPGTRLYKSLKSKDRMVKMVRKIVEERKKLKKLMIDNDADDEGDAVNDVLEALLRDKDDSSSSARLSPDMISQNIIEMMIPGEETLPTAMTMALKFLSDSPIALSKLKEENMELKRLKTNCSEDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSLNDIEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPCRWEKIGAVAGCNSFAPFGGGNRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIVYFPTVKMKRKLPIWVQPISA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03017 490 Gene3D Cytochrome P450 25 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 Pfam Cytochrome P450 37 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 Coils Coil 322 342 - -
Vimu7g03017 490 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS E-class P450 group IV signature 423 439 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS E-class P450 group IV signature 439 457 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS E-class P450 group IV signature 351 367 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 PRINTS E-class P450 group IV signature 400 418 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 26 488 - -
Vimu7g03017 490 SUPERFAMILY Cytochrome P450 34 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g03017 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vimu7g03017 490 CDD CYP90-like 68 487 - -
Vimu7g03017 490 PANTHER CYTOCHROME P450 26 36 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03017 Vimu-Chr7 25401453 25406556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03017 36 383 Cytochrome P450 AT4G36380 62.644 5.43e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03017 K12637 - gmx:100799030 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03017 7 25401453 25406556 Vimu7g03017 7 25401453 25406556 ECH