Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03008 ATGGGGGATACCCCAGGAAAGGACTGGAACTTGGGTGGTATCTATCTCTTCAGTCACTCCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAGATACTCAGCCCCGCTCACAGTTTCTGCTTTTACGTGCTTCTTTGGTGTTGTGCAGTTTTTGACAATTGCAGCTTTTTCTGAGAAGGATCCCAAAGCCTGGCAGTTCAATTCCAGTGCAGAAATCTACAGTGTTTTGTTTTCGGGAGTGGTGACTTCAGGGCTGGCATCAGCAGTACAGATATGGACTATTGGCAAAGGAGGGCCAGTTCTTGCTTCAATTTATCTACCTTTACAAACATTACTAGTAGCTGTGATGGCATCTATTATTTTCGGTGAAGAATTCTTCTTGGGAGGGTAG 405 0.442 MGDTPGKDWNLGGIYLFSHSLCWSGWIVMQAFVLKRYSAPLTVSAFTCFFGVVQFLTIAAFSEKDPKAWQFNSSAEIYSVLFSGVVTSGLASAVQIWTIGKGGPVLASIYLPLQTLLVAVMASIIFGEEFFLGG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03008 134 Pfam EamA-like transporter family 12 131 IPR000620 GO:0016020
Vimu7g03008 134 PANTHER WAT1-RELATED PROTEIN 7 132 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03008 Vimu-Chr7 25359807 25360473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03008 1 134 Nodulin-like Gene Family AT1G75500 57.463 1.94e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03008 - - gmx:100790386 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03008 7 25359807 25360473 Vimu7g03008 7 25359807 25360473 ECH