Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03007 TGGGATAAGAATTATCACTATCAGCAAACAATACAGAAAAGACTAAGAAACATGATACCCGAACGAGCTAATCTGCACATAGCCTTGACCTTTTTGCAATTTTGTTATGCAGGAAATCATATATTTGTGAGCATTGCACTTGATACAGGAGTAAGCAAGCTTATATTTGCTGTCTATAGAAACATCATCGCCTTGGTTCTTCTGGGTCCACTCGCGTATTTTTCAGAGAAGAAAGATAGGCCATCAATAACCACTTACTGTGTGGTACACTTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGCTTCTACCTCTTGGGTTTGGAGAAAACTTCACCTACGTTTGCCGCTGCTATGCAGAATTCAGTTCCTGCCCTCACTTTTCTGATGGCTGCACTACTCAGGCAAGCTACAATCTTTAACCTCTAA 435 0.4023 WDKNYHYQQTIQKRLRNMIPERANLHIALTFLQFCYAGNHIFVSIALDTGVSKLIFAVYRNIIALVLLGPLAYFSEKKDRPSITTYCVVHFFLLGLVGITMKEGFYLLGLEKTSPTFAAAMQNSVPALTFLMAALLRQATIFNL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03007 144 Pfam EamA-like transporter family 33 139 IPR000620 GO:0016020
Vimu7g03007 144 PANTHER WAT1-RELATED PROTEIN 27 134 IPR030184 GO:0016020|GO:0022857
Vimu7g03007 144 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03007 Vimu-Chr7 25358763 25359379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03007 8 137 Nodulin-like Gene Family AT1G75500 60.769 1.27e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03007 - - gmx:100790386 223.787