Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03001 AACACCACTTCAACCACCCTTGTGCAATTGTTGTTCAGGGAAGTGTTCTTGAAAGGAACAACAATGGTCAACTCCATAAACTTTCTCCTGCTTCTGTCTCTACTACCCTTTGCTCCCTTCTGTCACTGTGAAAAGAAAAATGAAGGTTATCTTTACCCTCAATTTTATGACGGTTCATGCCCCAGAGTTCAAGAGATTGTCCAATCTGTTGTTGCCAAGGCTGTGGCAAAGGAACCCCGCATGGCTGCTTCATTGCTGAGGCTACATTTCCATGATTGTTTTGTCAAGGGGTGTGATGCATCAGTTTTGCTAGACAGCAGTGGAACTATTATCAGTGAAAAGAGGTCAAATCCCAACCGTGATTCAGCACGAGGATTTGAAGTCATTGATGAAATTAAATCCGCACTAGAGAAAGAATGTTCACATACAGTGTCATGCGCTGACATTTTGGCTCTAGCTGCGAGAGATTCAACTGTTCTTACCGGAGGACCAAGCTGGGAAGTACCTTTAGGGAGAAGGGACTCTCTAGGTGCAAGCATCAGTGGCTCAAATAACAACATTCCTGCTCCCAACAACACATTCGAGACTATTCTAACTAAGTTCAAGCTTAAGGGGCTTGACATTGTTGATCTCGTTGCTCTATCTGGGAGCCACACTATTGGAGATTCCCGGTGTACCAGCTTCAGGCAGAGACTCTACAACCAAACTGGCAATGGAAAAGCAGACTTCAGTCTTGATCAACAGTATGCTGCTGAATTGCGCACTCGGTGTCCAAGATCTGGTGGGGACCAGAATCTGTTTGTCTTAGACTTTGTTACCCCACTTAAATTTGACAACTTCTACTACAAAAACTTGTTGGCTAACAAGGGTCTGCTAAGTTCTGACGAAGTTCTATTGACAAAGAATAAAGAATCCGCGGATTTAGTGAGGAAGTATGCAGAGAGAAATGACCTATTCTTTGAACAATTTGCCCAGTCCATGGTTAAGATGGGAAACATCACTCCTCTAACAGGATCAAGGGGAGAGATCAGAAAGAACTGCAGAAAAATTAACAAGTGA 1059 0.4353 NTTSTTLVQLLFREVFLKGTTMVNSINFLLLLSLLPFAPFCHCEKKNEGYLYPQFYDGSCPRVQEIVQSVVAKAVAKEPRMAASLLRLHFHDCFVKGCDASVLLDSSGTIISEKRSNPNRDSARGFEVIDEIKSALEKECSHTVSCADILALAARDSTVLTGGPSWEVPLGRRDSLGASISGSNNNIPAPNNTFETILTKFKLKGLDIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKADFSLDQQYAAELRTRCPRSGGDQNLFVLDFVTPLKFDNFYYKNLLANKGLLSSDEVLLTKNKESADLVRKYAERNDLFFEQFAQSMVKMGNITPLTGSRGEIRKNCRKINK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03001 352 Gene3D Peroxidase, domain 2 188 331 - -
Vimu7g03001 352 FunFam Peroxidase 188 330 - -
Vimu7g03001 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Vimu7g03001 352 SUPERFAMILY Heme-dependent peroxidases 51 351 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 ProSiteProfiles Plant heme peroxidase family profile. 50 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 Pfam Peroxidase 67 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 FunFam Peroxidase 54 195 - -
Vimu7g03001 352 CDD secretory_peroxidase 51 350 IPR033905 GO:0004601|GO:0042744
Vimu7g03001 352 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601
Vimu7g03001 352 Gene3D - 55 351 - -
Vimu7g03001 352 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PANTHER PEROXIDASE 72-RELATED 50 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g03001 352 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03001 Vimu-Chr7 25283985 25290346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03001 22 351 Peroxidase AT5G66390 75.075 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03001 K00430 - gmx:100788562 619.387