Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02943 ATGGGCTGGCCATTTCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCTACCACAATAGGGGAATTCATGGAGCAGCACATAGCAAGGTATGGTACAATTTACAAGTCCAAGCTATTTGGGGAGCCAGCGATAGTGTCAGCAGACGCAGGACTCAACAGGTTCATTCTACAGAACGAGGGGAAACTGTTCGAGTGCAGCTACCCCAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGCTGGTCTTGGTTGGCGACATGCACAGAGACATGCGGGTTATATCACTCAACTTCCTAAGCCACGCCAGGCTCAGAACCCACCTCTTGAAAGAGGTGGAGAAACACACCCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACATTCTCGGCCCAAGATGAAGCCAAGAAGTTCACCTTCAATCTGATGGCTAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTGAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTATCCGCGCCACTGAATCTACCTGGAACTGCATACCGAAAGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGAAAAATGGAAGAGAGGGTGAAGAGAATCCAAGAAGGAAACGAGAGTTTGGAGGAAGACGATCTTCTGAACTGGGTTTTGAAGCACTCGAATCTCTCGACGGAACAAATTCTGGACTTGATTCTGAGCTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCTATAGCTCTAGCCATTTACTTTTTGCCCGGCTGTCCTCAAGCTATGCAACAGTTAAGGGAAGAGCACAGTGAAATTGCCAGAGCGAAGAAACAAGCAGGGGAAGTGGAACTGACATGGGAAGATTACAAAAGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTGAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGACGTTAATTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACAATTCAATCCATGGAGATGGCAGAACAATGGCGGTCGTGGGAGTTGTCCGAGCAAGAGCGCAGCAAACAATAACTTTCTTCCGTTCGGAGGAGGATCACGGCTGTGCGCCGGATCAGAGTTAGCCAAGCTTGAAATGGCGGTTTTCATCCATTATCTCGTCCTCAACTACCACTGGGAATTGGCCGAAACAGATCAAGCTTTTGCCTACCCTTTCGTGGACTTCCCAAAGGGCCTACCCATCACAGTCCAAGCCCACTCTCTCATTTGA 1347 0.4759 MGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMQQLREEHSEIARAKKQAGEVELTWEDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQQFNPWRWQNNGGRGSCPSKSAANNNFLPFGGGSRLCAGSELAKLEMAVFIHYLVLNYHWELAETDQAFAYPFVDFPKGLPITVQAHSLI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02943 448 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 Gene3D Cytochrome P450 1 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 Coils Coil 200 220 - -
Vimu7g02943 448 FunFam Cytochrome P450 90B1 1 444 - -
Vimu7g02943 448 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Vimu7g02943 448 SUPERFAMILY Cytochrome P450 2 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 Pfam Cytochrome P450 3 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 304 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 344 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02943 448 CDD CYP90-like 28 442 - -
Vimu7g02943 448 PANTHER CYTOCHROME P450 26 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02943 Vimu-Chr7 24794649 24797969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02943 2 367 Cytochrome P450 AT3G50660 78.295 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02943 K09587 - gmx:100789515 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02943 7 24794649 24797969 Vimu7g02943 7 24794649 24797969 ECH
Vimu7g02943 7 24794649 24797969 Vimu7g02943 7 24794649 24797969 PCT