Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02932 ATGAAACAAGCAGCTGCAAAGTCATCCCTTAGGAGGCTTTGTCCGAACATCGATAGAGAAGATGGGTTGGAGACCGTTCTTGAAATTCCAATACCCGAAGAAATGTTCACACCCATGGGAAGCAACGTAGCGTTGCGCTGGCAAAACATGTTAACGTGGATGAAGGCTCAAACAGAAGACAAATTATCCACCCCTACAGTTTCAGCGCGCTTAAATGAGCTTCGCTTTCTGCTTTACCTCGTTGGCTCTCCTCTTATCCCTCTTCAGGTCCAATTAGGTCATTCCGTCCGTCGTCCGGTCAGAGATTGTTCTATTGAAGCATCAACGGCAAAGTATATAGTACAACAGTATATAGCGGCAACGGGAGGACAACCGGCATTGAATGCGGTGGATAGTATGTGTGTTCTTGGGCAGATAAAGATTGTTGCGTCAGATTTTCACCAGACTTGTGAAACCATTGAGGTGAAGAAAACCTCGGAAGAGATGGGAGGGTTCGTTTTGTTGCAAAAGGATCCCGATTTGTGGTGTTTAGAGATTCTTGTGTCAGGGTGCAAGGTTTCTTGCGGTAGCAATGGCAAGGTCTCTTGGCGCCATTCCTCTAACCAGCAGACACCAATTTCAAGAGGTGCTCCTAGACCTCTACGTCGTTTCCTTCAGGGATTGGATCCAAGGGCAACGGCTAACTTATTTTTGGACGCTGCATGCATAGGAGAGAAAATAATCAATGACGAAGAGTGCTTCATCTTGAAATTGGAAACAAGTCCAGCAATTCGTGATGCCCAAAGCGGACCAAACTTTGAGATTATCCACCACACAATATGGGGCTATTTTAGCCAGCGATCTGGTCTCTTAGTTCAGTTCGAAGATTCAAGATTACTGACGATGAGAACCAAAGAGGACAACGACATTTTTTGGGAAACAAGTTTAGAATCAGTAATTGAGGATTACAGGTACGTAGATGGGATAAACGTATCACACAGTGGGAAGACTCGAGTTACAGTTTCCAGATACGGTGAACAATCAGCTAACCACAAAAGAGAATTGGAAGAGAGATGGAAGATCGAAGAGGTAGATTTTAATGTCTGGGGTTTGAATGCTGAAAGCTTTCTACCTCCTTCAAACTTAGGAAAGACATAA 1137 0.4442 MKQAAAKSSLRRLCPNIDREDGLETVLEIPIPEEMFTPMGSNVALRWQNMLTWMKAQTEDKLSTPTVSARLNELRFLLYLVGSPLIPLQVQLGHSVRRPVRDCSIEASTAKYIVQQYIAATGGQPALNAVDSMCVLGQIKIVASDFHQTCETIEVKKTSEEMGGFVLLQKDPDLWCLEILVSGCKVSCGSNGKVSWRHSSNQQTPISRGAPRPLRRFLQGLDPRATANLFLDAACIGEKIINDEECFILKLETSPAIRDAQSGPNFEIIHHTIWGYFSQRSGLLVQFEDSRLLTMRTKEDNDIFWETSLESVIEDYRYVDGINVSHSGKTRVTVSRYGEQSANHKRELEERWKIEEVDFNVWGLNAESFLPPSNLGKT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02932 378 PANTHER LIPASE 11 375 IPR006873 -
Vimu7g02932 378 Pfam Protein of unknown function (DUF620) 133 372 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02932 Vimu-Chr7 24678002 24679497 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02932 - - gmx:102664990 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02932 7 24678002 24679497 Vimu7g02932 7 24678002 24679497 ECH
Vimu10g03620 10 45552976 45554494 Vimu7g02932 7 24678002 24679497 ECH
Vimu5g02344 5 34293969 34296285 Vimu7g02932 7 24678002 24679497 ECH