Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02919 ATGAGAGTTCCCGTTCCCTCATCCCCACAGGCTAACCCAAAACCCACTAATAACCTACTCCGTACCATTGCACTTCCCAACCTCAACACCACGGGCCTCTGCTACGAGCCCACCTCTGTCCTCGACCTGTGCCGAAGCCCCAGCCCGGGCTCCGAAAAGCCCACCGATCACTCAGTTGTCGTAACGGACTCCCAAGATTGTCTCGACCTGGACGACCATGCGTTGCACAACTTGGATTGGGACTCCATCATGAAGGACTTGGGCTTACACGACGACTCTGGTGCTCCCCTCTTGAAGACTATTCCCCACCCCGACAACAACAATAACAACCCATGCGACGACTTCACTATCCCACCCTTCGACCACGCCATTGAATTCTCCACTCTCTCCGACATCTACTCCAACCAAAACCTCACCTTCGATTTCAACCACCTCGTTCACGACTTCAGCAACCAACATCACAACAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCGGATTGCTTCGACACCAAGCAGTTACACGTCGCACAGGTGATATTGGAGCGGCTCAATCAACGGCTACGATCCCCCGTGGGGAAACCTCTCCAACGCGCAGCGTTTTACTTCAAAGAAGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCGGACGCCCAGGATTTCCTCGCTGGTGGAAATCGTGCATGGCATCAGAACCTTCAAGGCCTTCTCCGGAATCTCGCCGATCCCAATGTTCTCGATCTTCACCACCAACCAGGTGGTTCTCGATCACGCTGCGTGCTCCTTCATGCACGTTATCGACTTCGACATCGGCCTTGGGATCCAATACGCTTCTCTCATGAAGGAGATAGCGGAGAAGGCCACGGAATCGCCGCTTCTCCGAATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCACGCTGGTACGCGAAAACCTGGGGCAGTTTGCTCTCGAACTCAGGATTCGCGTCCAGGTCGACTTCGTTCCGCTCCGAACCTTCGAGACGCTCTCCTTTAAGGCAGTGAAGCTCGTCGACGGCGAGAGCACCGCCGTGCTCCTTTCCCCAGTGATTTTCCGCCACCTCGGAAATGCTGCCGCGTTCTTGGCGGACTTGCGGATGGTCTCTCCCAGCGTGGTGGTTTTGGTGGATAGCGAGGGGTGGGCGGATATGGCCACAGCAGCAGCCTCGTCGTTCCGACGGGGCGTCGTGAGCAGTTTGGAGTACTACTCGATGATGTTGGAGTCGCTGGATGTGTCGACGGCTGGGGGAGGAGGGGAGTGGGTAAGGAGAATCGAGATGATGCATCTACGACCGAAGATTTTGGCGGCGGTGGAGAGTTCATGGGGGCGGATGCCACCGTGGAGGGAGAGCTTTTACGGCGCCGGAATGCGGCCGGTTCATTTGAGCCAGTTTGTGGATTTCCAAGCAGAGTGCTTGTTGGCCAAGTCGCAAATCAGAGGCTTCCACGTGGAGAAACGTCAGAACGAACTTATACTGTTCTGGCATGACAGGGCCATGGTTTCCTCGTCAGCTTGGCGGTTTTAG 1557 0.562 MRVPVPSSPQANPKPTNNLLRTIALPNLNTTGLCYEPTSVLDLCRSPSPGSEKPTDHSVVVTDSQDCLDLDDHALHNLDWDSIMKDLGLHDDSGAPLLKTIPHPDNNNNNPCDDFTIPPFDHAIEFSTLSDIYSNQNLTFDFNHLVHDFSNQHHNNGFDFIEELIRAADCFDTKQLHVAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRISSLVEIVHGIRTFKAFSGISPIPMFSIFTTNQVVLDHAACSFMHVIDFDIGLGIQYASLMKEIAEKATESPLLRITAVVPEEYAVESTLVRENLGQFALELRIRVQVDFVPLRTFETLSFKAVKLVDGESTAVLLSPVIFRHLGNAAAFLADLRMVSPSVVVLVDSEGWADMATAAASSFRRGVVSSLEYYSMMLESLDVSTAGGGGEWVRRIEMMHLRPKILAAVESSWGRMPPWRESFYGAGMRPVHLSQFVDFQAECLLAKSQIRGFHVEKRQNELILFWHDRAMVSSSAWRF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02919 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 159 511 IPR005202 -
Vimu7g02919 518 ProSiteProfiles GRAS family profile. 151 517 IPR005202 -
Vimu7g02919 518 Pfam GRAS domain family 161 517 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02919 Vimu-Chr7 24577485 24579947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02919 68 518 GRAS Transcription Factor Family AT4G36710 54.430 5.82e-166 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu7g02919 GRAS 6.5e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02919 - - gmx:100807470 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02919 7 24577485 24579947 Vimu7g02919 7 24577485 24579947 ECH
Vimu7g02919 7 24577485 24579947 Vimu7g02919 7 24577485 24579947 PCT