Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g02890 | ATGGAAGCTGAAGCCAACTTCTTGGTTATTGTCATCTCCCTTTTCTTTCTATGGAATTGGTTTGCAAAATATTACAAGCTAAAACCTAATCAGAAACTCCCCCCTGGTCCAAAGAAGCTACCTTTCATAGGCAACCTGCATCAACTATCAGGAGCAGGTTCACTTCCACATCGTGCTTTCTACAAGCTAGCTCTTAAATATGGACCTCTCATGCACCTCCAACTTGGTGAAATTTCTACAGTGGTTGCATCCTCCCCCGGCTTGGCCAAGGAAATAATGAAAACGAATGATATTGCTTTTGTGCAGAGGCCTCAATTTGTTTTCGGTGACATTTTGTCCTATGGAGGAAAGAATATTGTTTTTGCTCCATATGGTGATTACTGGAGACAAATAAAAAAAATATCTGTGTTGGAGCTTCTTAGCGCCAAAAGGGTCAAGTCTTTCTCTTTCATCAGAGAAGAGGAGACAGCAAAGTTTATTGATTCAATTCGAAAATCAGCAGGTTCACCCATCAATCTTACTGATAAAATTTACTCCTTGATAAGTGATTTTGTTTTCAGGGCAGCTTTTGGTAGAAAATATAAGGACCATGAATTTGTCGTGCCTCTGATGCGAAGAGTAATAGAAGAAGCGACAGGATTTGGTTTTGTCGATCTCTTTCCTTCGTTGAAATTCATACATTTCATAACTGGAAAGAGGGCAAAATTGGAGAAGCTGCAGAAGCAGGTTGACGAGGTATTGGATAACGTTGTCAAAGAACATGAAGACAAACGAAAAGAGGCAAAAGAAGACGGGGTTGAAGTGGAGGATGAGGATTTTGTCGACGTTCTTCTCAGAATTCAACAAGATGACAATCCCGACTTCAAGATGACGACGACACAAATCAAAGCTTTGATATTGGATATATTTGTGGCGGGAACTGATACTTCAGCGTCAGTATTAGACTGGATGATGGCAGAAATTGTGAGAAATCCAAGAGTGATGGAGAAAGCACAAAGTGAGATAAGAGAAGCATTTAGAGAAAAGAAAAGAATAGATGAAAGTGATGTAGAGGAGCTTAATTATTTGAAGTTGGTGATGAAAGAAACGTTGAGGTTACACCCACCAGTTCCTTTGTTGCTCCCTAGAGAATGCAGTGAAGTAAGAAAGCTTGGGGGATACGAAATACCAAAAAAGACAAGAGTTATGATAAACGCATGGAGTATGGGAAGAGATCCTGAATATTGGAGTGATGGTGAGAGGTTTATCCCAGAGAGGTTTGAAGGTAACTGCGTGGATTTCAAAGGGAATAACTATGAGTATGTGCCATTTGGAGCAGGAAGGAGAATGTGCCCAGGCATGGCATTTGGTTTGGCAAGCATTATGCTTCCTCTGACTCTCTTACTCTATCACTTCAACTGGGAACTACCAGATAATATCAAAGCTGAGGATATGGATATGGCTGAACACTTCGGAGTCGAAGCAGTTGCCAAAATACAATGCACGGATGTCCCACTATCGTTGGGCCTGGTAAAAGAGGTTTGGATTTTTCAAGCACACCAATTGAAAAAGAAATATTTGAGCCCGCTGAACCTGCTCATCCACGGCCTCGCACACCTAGTGTTTGATTATTTGTGTCACCCCGACGAAGAATACCAACGGTTCCTGGATTATGAATTGTCGTTCTTTTGCGAGGTTAACCTGTTGAACAGGTTAAGCTCGCAAGTGCAAGCTCGTCCATATGTCCGTCGTCGTGAACCGTTTCCCACAAAAGTTTCTCACTACCTCAAACGTGCCAAACTCATTGACTCCATTAGACTCACTCTACGCTCTAAAAACCCCGACTCCTCTCTTCCCTCTCTCATAAACCACCGTCTTTTTGACTCTTTCGTGCTCACTCATGCCATTCGTTCTTCCCCCTCTGCCGATTCCGCTCTTTCCCTTGTTCATGCCCTTGAAAAAAATTCCAATTTTTCCCACACCCACCACACGCTCCATGCACTTGCAACTGTTCTTGCGAAGTCTGGTAAATGCTCCGCGCTCAAATCCCTCATTGATGATATCCAAGCCAACCGATTCGGCACCGTTCGGATCAGCTTCATGAATCTCATGCAGTGGCATGCTGCAGCTGGGGACCTGGACACTGTCCTTCAAGTGTGGGAACAGTATACACTCGAGAGCAACCATCTCTGCACTGAATCATATAATATTGTTATGGCTCTCTATGCTCAAATGGGTAAGGACTCGCAGGCTGTACGAGTTTTTCAGGGGATGATTGATGAAGGGTCTCTGCCGAATTGCAGGAGCTGCACTATAATAATCGAGCACCTTGTGAAGTCCCGGAAGTTATCGGAAGCATTGGAGGTTTTTAATCTGTTGCCTTTGATGAGGGTCAAACGAACTTTGAAGCAGTACTCCGTTCTGCTAGAGGGTTTTGTAGGTAGCAAACGGTTTGATGAAGTGAAAATTTTAGTTGATGAAATGCAGGTTGATGGAATACTTCCTAGTAGAGGCGTAAGTTTGTTGCTGCAGCAGATGAAAGAGGAAGGAATTTTTGAAGATAAGGAGCAATTACTGCGAGGAATTTTTCCAGATGAGAGAATTAGTACTGTAAGTTATTCTGTTGATGGTGGTGACGGGGATGATGATGAGAATGAGAATGAGGTTGAAGACGAGAATATAAATGATGCTAGTCAATGTGATCTTGTTGATGGAGTTCATTTAAAACCGTGGTTGGACCCACGGGCTTTGGCCAGTGCCTTGCGGAATTGGAGTCCTGATGAGGTAGCAGCACTAGAGGGTGCAAACTTTGTGTGGACAACAAGGTTGGTCTGCAAGATGCTTAGAAATTTCAAAACACCAGAAGCTGCATGGAGTTTCTTCTGCTGGGTTGCTAATCAAAATGGATTTACTCATGACATATACACGGTACAAAGAATCATGACCCTACTTGCACGCCATGGACGTACTGACTTGGTTAATACACTCATCTCCAAGATCAGAATGGAGGGAATGAGACTACCATTCAACACCATCAGGCTGATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTATGAAGGTTTTCAATGACGATCGAATACTTTGCGGTCCCATATCAAATGTAAACCTGATGCTTCTGTATTCGTCTCTTCTAAGAACATTGACTAAGTGTGGAAGAAACTCCGATGCCTTGGATATGCTTGATGACATGATTTTAAATGGTATTTGCCCAGATATCCAGACATTTTCAGGCCTAATGCTCTACTTTTCACAGCTTGGGGACATAAAAACAGTACAAAAGCTCTTTGCAATGATTAGGCAGAGTGGTCTAGAGCCAGATGCTTATTTATTTAAGGTATTAATCCAAGGTTATTGCAAGTCAAATAGAGCTGCACTAGCATGGAGGCTCTTTGAAGACATGAAGAATTCTGGTTTAGTGCCTGACTCTGCCACCAAAGAGTTGTTAGTAAAGAGTCTCTGGAAAGAGGGGAGACGAAGAGAGGCTGCAGCAGTAGAAGAGAGTTGTGAGGAAATAAATACGGTTCTTCCACTTGCATTGCAGGAGAGCTATCCATCGGCCTATACGATGGATGTGAATTCCTTCGCACATGAAATCTCAGCACACACTCTTACAGTTATGAATAAACAAGGGATGCACTCGGGTGGTGAAAGAAAGGGTGGCGGAACAACGTTAAGAGAAACAGATACGGACGGCATTTAG | 3711 | 0.4279 | MEAEANFLVIVISLFFLWNWFAKYYKLKPNQKLPPGPKKLPFIGNLHQLSGAGSLPHRAFYKLALKYGPLMHLQLGEISTVVASSPGLAKEIMKTNDIAFVQRPQFVFGDILSYGGKNIVFAPYGDYWRQIKKISVLELLSAKRVKSFSFIREEETAKFIDSIRKSAGSPINLTDKIYSLISDFVFRAAFGRKYKDHEFVVPLMRRVIEEATGFGFVDLFPSLKFIHFITGKRAKLEKLQKQVDEVLDNVVKEHEDKRKEAKEDGVEVEDEDFVDVLLRIQQDDNPDFKMTTTQIKALILDIFVAGTDTSASVLDWMMAEIVRNPRVMEKAQSEIREAFREKKRIDESDVEELNYLKLVMKETLRLHPPVPLLLPRECSEVRKLGGYEIPKKTRVMINAWSMGRDPEYWSDGERFIPERFEGNCVDFKGNNYEYVPFGAGRRMCPGMAFGLASIMLPLTLLLYHFNWELPDNIKAEDMDMAEHFGVEAVAKIQCTDVPLSLGLVKEVWIFQAHQLKKKYLSPLNLLIHGLAHLVFDYLCHPDEEYQRFLDYELSFFCEVNLLNRLSSQVQARPYVRRREPFPTKVSHYLKRAKLIDSIRLTLRSKNPDSSLPSLINHRLFDSFVLTHAIRSSPSADSALSLVHALEKNSNFSHTHHTLHALATVLAKSGKCSALKSLIDDIQANRFGTVRISFMNLMQWHAAAGDLDTVLQVWEQYTLESNHLCTESYNIVMALYAQMGKDSQAVRVFQGMIDEGSLPNCRSCTIIIEHLVKSRKLSEALEVFNLLPLMRVKRTLKQYSVLLEGFVGSKRFDEVKILVDEMQVDGILPSRGVSLLLQQMKEEGIFEDKEQLLRGIFPDERISTVSYSVDGGDGDDDENENEVEDENINDASQCDLVDGVHLKPWLDPRALASALRNWSPDEVAALEGANFVWTTRLVCKMLRNFKTPEAAWSFFCWVANQNGFTHDIYTVQRIMTLLARHGRTDLVNTLISKIRMEGMRLPFNTIRLIIDFYGISKNADAAMKVFNDDRILCGPISNVNLMLLYSSLLRTLTKCGRNSDALDMLDDMILNGICPDIQTFSGLMLYFSQLGDIKTVQKLFAMIRQSGLEPDAYLFKVLIQGYCKSNRAALAWRLFEDMKNSGLVPDSATKELLVKSLWKEGRRREAAAVEESCEEINTVLPLALQESYPSAYTMDVNSFAHEISAHTLTVMNKQGMHSGGERKGGGTTLRETDTDGI | 1236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02890 | 1236 | Pfam | Cytochrome P450 | 34 | 480 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1075 | 1109 | IPR002885 | - | |
| Vimu7g02890 | 1236 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 794 | 828 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Pfam | PPR repeat family | 1109 | 1156 | IPR002885 | - | |
| Vimu7g02890 | 1236 | FunFam | Cytochrome P450 71D8 | 26 | 495 | - | - | |
| Vimu7g02890 | 1236 | Gene3D | Cytochrome P450 | 26 | 496 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | NCBIfam | pentatricopeptide repeat | 1044 | 1076 | IPR002885 | - | |
| Vimu7g02890 | 1236 | NCBIfam | pentatricopeptide repeat | 727 | 760 | IPR002885 | - | |
| Vimu7g02890 | 1236 | NCBIfam | pentatricopeptide repeat | 1114 | 1146 | IPR002885 | - | |
| Vimu7g02890 | 1236 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1110 | 1144 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Coils | Coil | 328 | 348 | - | - | |
| Vimu7g02890 | 1236 | Gene3D | Tetratricopeptide repeat domain | 924 | 1033 | IPR011990 | GO:0005515 | |
| Vimu7g02890 | 1236 | Pfam | PPR repeat | 1044 | 1072 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Pfam | PPR repeat | 762 | 785 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Pfam | PPR repeat | 798 | 826 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Pfam | PPR repeat | 727 | 755 | IPR002885 | - | |
| Vimu7g02890 | 1236 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 724 | 758 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Gene3D | Tetratricopeptide repeat domain | 625 | 894 | IPR011990 | GO:0005515 | |
| Vimu7g02890 | 1236 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | MobiDBLite | consensus disorder prediction | 1214 | 1236 | - | - | |
| Vimu7g02890 | 1236 | SUPERFAMILY | Cytochrome P450 | 34 | 485 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PANTHER | OS01G0167750 PROTEIN | 554 | 1195 | IPR044175 | - | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02890 | 1236 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506|GO:0016705 | |
| Vimu7g02890 | 1236 | CDD | CYP71-like | 66 | 486 | - | - | |
| Vimu7g02890 | 1236 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1040 | 1074 | IPR002885 | - | |
| Vimu7g02890 | 1236 | Gene3D | Tetratricopeptide repeat domain | 1039 | 1228 | IPR011990 | GO:0005515 | |
| Vimu7g02890 | 1236 | Coils | Coil | 229 | 271 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu7g02890 | Vimu-Chr7 | 24380306 | 24390692 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02890 | 10 | 499 | Cytochrome P450 | AT5G25120 | 41.683 | 1.52e-129 | 405 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g02890 | - | - | gmx:100779372 | 1038.1 |