Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02889 ATGGAAGCTCAAACCTGCATCTTGGTTATTGCCTTCTCCCTAATATTTCTATTGAATTGGTTCGCAAAACATTACAAAAATCATGTCTCTCTCAAACTTCCCCCAGGCCCAAAGAGGCTACCCATCATAGGAAACCTTCATCAACTAGCAGCAGCAGGTTCACTTCCACACCGTGCTCTCCGAAATCTTTCCCATAAATATGGACCTCTCATGCACCTTCAACTTGGTGAGATTTCTTTAGTGGTTGCATCCTCCGCGGAGATGGCCAAGGAAATAACCAAAACACATGATGTCGCTTTTGTGCAAAGGCCTCAGTTTATTTCTGGACAAATTTTGTCATACGGGGGCATAGATGTTGTTTTTGCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATTTGTCTCAGAACTTCTAAGTACCAAGAGAGTTCAGTCTTTCTCTTTTATTAGAGAAGACGAGACGGAAAAACTTATAGACTCGATTCGAACATCAGCAGGTTCACCAATCAATCTTACTGGCAGAATTTTCTCGTTGGTAAGCACTACTGTTTCCAGGGCAGCATTTGGTAACAAATCAAAAGATCAGGATGAATTTTTACTTTTGATTAGGAAAGTAATAGGATCGGTTGGAGGATTTGACCTTGCTGATTTGTTCCCTTCGATGAAATCCATACATTTCATAACTGGAAAGAAAGCCAAATTGGAGAAGCTGCTGAATCAGGTTGACAGGGTCTTGGAAAATATTGTCAAAGAGCATCAAGAAAAGCAAAGAAGAGCGAAAGAAGGGAGAGCTCAAATAAAGGACGAAGATCTTGTTGATGTTCTTCTCGGATTCCAACAAGCCGACGCTGCTCTCGATATCAAAATCACCACTAGGAACGTCAAAGCTTTGATATTGGACGTATTTGCTGGTGGCGTTGATACTTCTGCATCAACAATAGAGTGGGCAATGACAGAAATGATGCGAAGTCCAAGAGTGATGAAGAAAGCACAAGCTGAGTTAAGAGAAGCATTAAGAGAGAAGGAAATGATCCATGAAAGGGATCTAGAGCAGCTTACTTATTTGAAGTTGGTGGTCAAAGAGACATTGAGGCTACACCCACCAACTCCATTGTTGATCCCTAGAGAATGCTCTGAACGAACCATGATCGATGGGTATGAAATACCTGTGAAAACTAAAGTGATGATAAACGTATGGGCAATTTGCAGGGATCCCAAATACTGGAATGATGCAGAGATGTTTGTCCCAGAAAGGTTTGAGGGAAGTAGTATCGATTTCAAAGGGAATAACTTCGAGTATCTGCCATTTGGAGCAGGAAGGAGAATATGCCCTGGCATCTCGTTTGGTTTAGCAGGTATCATGCTTCCACTGGCTCGATTACTTTATCATTTCAACTGGGAACTTCCAAATGGCATGACACCTGAGAGTATAGACACGGTTGAACGCTTTGGAATGGCCATTGGCAGGAAAAACGAATTGTGTTTGATCCCCATTGTTTATGATCCTTGA 1515 0.4172 MEAQTCILVIAFSLIFLLNWFAKHYKNHVSLKLPPGPKRLPIIGNLHQLAAAGSLPHRALRNLSHKYGPLMHLQLGEISLVVASSAEMAKEITKTHDVAFVQRPQFISGQILSYGGIDVVFAPYGDYWRQMRKIFVSELLSTKRVQSFSFIREDETEKLIDSIRTSAGSPINLTGRIFSLVSTTVSRAAFGNKSKDQDEFLLLIRKVIGSVGGFDLADLFPSMKSIHFITGKKAKLEKLLNQVDRVLENIVKEHQEKQRRAKEGRAQIKDEDLVDVLLGFQQADAALDIKITTRNVKALILDVFAGGVDTSASTIEWAMTEMMRSPRVMKKAQAELREALREKEMIHERDLEQLTYLKLVVKETLRLHPPTPLLIPRECSERTMIDGYEIPVKTKVMINVWAICRDPKYWNDAEMFVPERFEGSSIDFKGNNFEYLPFGAGRRICPGISFGLAGIMLPLARLLYHFNWELPNGMTPESIDTVERFGMAIGRKNELCLIPIVYDP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02889 504 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PANTHER OS08G0105600 PROTEIN 59 503 - -
Vimu7g02889 504 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 Gene3D Cytochrome P450 26 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vimu7g02889 504 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 SUPERFAMILY Cytochrome P450 34 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02889 504 Coils Coil 329 349 - -
Vimu7g02889 504 Coils Coil 229 271 - -
Vimu7g02889 504 FunFam Cytochrome P450 71D8 26 499 - -
Vimu7g02889 504 CDD CYP71-like 66 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02889 Vimu-Chr7 24372079 24374143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02889 3 499 Cytochrome P450 AT3G26310 43.762 7.78e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02889 - K15472 gmx:100785715 809.675