Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02869 ATGTTTGTTCACCACCGTACGAATCTCGTTATAGTCCTCACGATCTTGATAGCGTGCACAGCAAGAGCGCAAAACCTCACCTGCAATAGGCAATGCGGGAAGCAGAGTGTTCAGTTCCCTTTCGGATTCTCCGAAGGTTGTCAAATCATACTAAACTGTTCCGACAACAAAGTTCATCTTCACGAATTTCTGGTCCAAAACGTTACCAACAGCAACATATTAGTCAATCTCCCTGCAAAATGCAACCGCAGCATGGAATCCATTGAGCCACTTTTCGGTAACAATTTTGCTCCCTCTGTTAACAACAGCTTTCTGGTGAAAGATTGCAGCGATGCGTCTCGTGGGTGCGTTATTCCGGCTACGAATTTTGTGGAAACCTGCGGTAATAAAAGTAGTAATATCAGTTGCTTTTCGAAACAAGATGAGGCAGGTGTTCTGACGTACAAAGATTTGAAAGAAACTAAGTGTAATTACTTGTTCTCTGCGATTTATTTTGGGCAGAGCAAGGAGATTACGCTGCAGTTTCAGGTGGTCGAGTTGGCGTGGTGGCTTCAAGGACAGTGTGATGAATGTTCTGAAAACGCTACCTGCTCAAAGGTCCAAAGAGGGTTTCGGTGCCAGTGTATCCATGGTTTCACCGGCGACGGCTTCATAAACGGCACCGGTTGCCGGAAAACTTCGGCTTCAAGTTGCAGTGCTTCAACACTGGCTTCCGGGGGATGCGGAAAAGCAACCAAAATCGGTGTTGCTGTTGGAGCGAGCATAGCTGGAGCTTTGGTGGTGGCTGGTCTCTTTCTTCTATGCTACTATGCTAGGCGCCGCTCTATTTGGTTGGGAAAACATACCAGAGTAAAGCGGCAATTACGTGAAGCTGCAGGAAACTCAAGTATACCTTTCTATCCCTACAAAGAAGTAGAAAAAGCCACAAATTCTTTCTCTGAGAAACACAGGCTGGGAACTGGGGCATTTGGTACAGTTTACGCCGGAAAACTGCACAGTGATGAATGGGTTGCTATCAAGAAGTTAAGGCAAAGAGACACCAACAGTGCTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCAGTGAGTCATCCAAATTTAGTTCGCCTCTTAGGTTGCTGCATAGAGAAGGGAGAGCAGATCCTTGTTTATGAATATATGCAAAATGGAACACTTTCTCAGCACTTGCAAAGAGAGAGGAGTGAAGGACTGCCGTGGACAGTAGCTGAACTTGCATTTAGATGCCTTGCTTTTCACAGTGACATGAGGCCTACTATGACGGAAGTGGCAGAGGAGCTAGAACACATTAAACGCAGTGGATGGGCAACTATGGAGGAAACTGCCATGACTTCATCGAATGGATCCACTTGTTCATCACCTCGCAATGGAAGTGAGAAGTCATTGAGTGGTATCAAAAAGGCTGGCCAAGGGAGTTCGAGATCGATAGTTCCCCAGAAGATTGAGAGATTTTTTCATTCTGTGGAGGTGAAAGATAGCTCTCCTGTATCAGTGCATGATCCGATTCATTGGTCGAGTGGACACAGCTCACCTTCGTCAAACAGCTTGTTGGTAAATGTCATCCCTTGA 1590 0.4585 MFVHHRTNLVIVLTILIACTARAQNLTCNRQCGKQSVQFPFGFSEGCQIILNCSDNKVHLHEFLVQNVTNSNILVNLPAKCNRSMESIEPLFGNNFAPSVNNSFLVKDCSDASRGCVIPATNFVETCGNKSSNISCFSKQDEAGVLTYKDLKETKCNYLFSAIYFGQSKEITLQFQVVELAWWLQGQCDECSENATCSKVQRGFRCQCIHGFTGDGFINGTGCRKTSASSCSASTLASGGCGKATKIGVAVGASIAGALVVAGLFLLCYYARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHRLGTGAFGTVYAGKLHSDEWVAIKKLRQRDTNSADQVMNEIKLLSSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRERSEGLPWTVAELAFRCLAFHSDMRPTMTEVAEELEHIKRSGWATMEETAMTSSNGSTCSSPRNGSEKSLSGIKKAGQGSSRSIVPQKIERFFHSVEVKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02869 529 FunFam Wall-associated receptor kinase-like 14 280 387 - -
Vimu7g02869 529 ProSiteProfiles Protein kinase domain profile. 312 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02869 529 MobiDBLite consensus disorder prediction 509 529 - -
Vimu7g02869 529 Pfam Protein tyrosine and serine/threonine kinase 315 402 IPR001245 GO:0004672|GO:0006468
Vimu7g02869 529 ProSitePatterns Protein kinases ATP-binding region signature. 318 341 IPR017441 GO:0005524
Vimu7g02869 529 SUPERFAMILY Protein kinase-like (PK-like) 292 408 IPR011009 -
Vimu7g02869 529 Gene3D Phosphorylase Kinase; domain 1 283 387 - -
Vimu7g02869 529 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 409 479 IPR044652 GO:0004672
Vimu7g02869 529 Gene3D Laminin 177 224 - -
Vimu7g02869 529 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vimu7g02869 529 MobiDBLite consensus disorder prediction 448 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02869 Vimu-Chr7 24207924 24211790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02869 408 527 Receptor kinase-like Gene Family AT2G23450 57.025 9.22e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vimu7g02869 PK_Tyr_Ser-Thr 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02869 - - vum:124829194 713.375