Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g02864 | AGCGTGAGGGTCATGGATGCTTTTCTGCTTAAAACACTTATTTCAGGCATTATTGCCCTGTTAGTGTTGTGCCCTTTGTTTTATCAATTTAAGAAAACACTTGGCGGCAATACAAAGATCTGTAGTGCACCTCAAGCAGCAGGTGCATGGCCTATTATTGGCCATTTGCATCTCTTCGGGAGTCATCAACTTACGCACAAAACACTTGGGGTCATGGCTGACAAACATGGTCCAATTTTCACAATAAAGCTTGGTTCATACAAAGTTCTGGTCTTGAGTAGCTGGGAGATGGCCAAAGAGTGTTTTACTGTCCATGACAAAGCATTCTCGACCAGGCCCTGTGTTGCAGCCTCAAAGCTAATGGGCTATAACTATGCCATGTTTGGCTTCACTCCTTATGGTCCTTACTGGCTTCAAGTACGGAAGCTAACGACCATTGAGCTTCTGTCTAACAACCGGCTTGAGCCCCTCAAAAACACAAGAACGTTTGAGTTAGATGCTGCAATAAGGGGGCTCTACGGTTTATGGTCAAAAGAAGGGTGTCCGGAGGGAGGAGTTTTGGTAGATATGAAGCAGTGGTTTGGAGATTTGACACATAATATTGCTATCAGAATGGTGGGAGGGAAGCCGTATTGTGGGGTTGGCGATGGTTATGCGGATGGTGAAGCAAGAAGGTATAGGAGAGCTATGAGGGACTGTGTATGTTTGTTTGGGGCGTTTGTGTTGTCTGATGCATTTCCATTTCTGGGGTGGCTAGATATCAATGGATATGAAAAGGATATGAAGAGAACTGCTAGTGAATTGGATACTCTAGTTGAAGGTTGGCTAGAGGAACACAAAAGGAAAAGAGCTTTGAATGTGAATGGAAAGGAAGAACGGGATGATTTCATGGATGTCTTGCTGAATGTTCTGCAGGGTACAGAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCCACTTGCCTGAATTTGATTTTAGCAGGAACTGACCCCACCATGGTCACGCTAACATGGGTGCTGTCTCTGCTACTTAACCATCCAACGGAACTTAAACGAACCCAACATGAACTGGACACTCTTATTGGGAAGGAAAGGAAAGTTGAAGAATCTGACATAAAGAAGCTGGTGTACCTCCAAGCCGTTGTGAAGGAAACTCTGCGCCTATATCCACCCAGTCCCATTATCACCCTTCGAGCAGCCATGGAAGACTGCACCTTTTCATGCGGCTATCACATTCCTGCGGGCACACAATTAATGGTGAATGCTTGGAAGATCCATCGGGATGGTCGTGTTTGGAGTGACCCTCATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAAAACTATGAGCTCGTCCCTTTTAGTTCTGGAAGGCGAGCATGCCCAGGTGCCTCACTAGCTCTGCGTGTAGTGCATTTGACCTTGTCTAGACTCTTACACTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTTGACATGACAGAGAGCTTTGGACTCACAAATTTAAAAGCAACCCCCCTCGAAGTTCTCCTAACTCCACGTCTAGACAACAAACTTTATGAGAACTAG | 1599 | 0.4497 | SVRVMDAFLLKTLISGIIALLVLCPLFYQFKKTLGGNTKICSAPQAAGAWPIIGHLHLFGSHQLTHKTLGVMADKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVAASKLMGYNYAMFGFTPYGPYWLQVRKLTTIELLSNNRLEPLKNTRTFELDAAIRGLYGLWSKEGCPEGGVLVDMKQWFGDLTHNIAIRMVGGKPYCGVGDGYADGEARRYRRAMRDCVCLFGAFVLSDAFPFLGWLDINGYEKDMKRTASELDTLVEGWLEEHKRKRALNVNGKEERDDFMDVLLNVLQGTEISGYDSDTIIKATCLNLILAGTDPTMVTLTWVLSLLLNHPTELKRTQHELDTLIGKERKVEESDIKKLVYLQAVVKETLRLYPPSPIITLRAAMEDCTFSCGYHIPAGTQLMVNAWKIHRDGRVWSDPHDFKPERFLTSHKDVDVKGQNYELVPFSSGRRACPGASLALRVVHLTLSRLLHSFNVASPSNQVVDMTESFGLTNLKATPLEVLLTPRLDNKLYEN | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02864 | 532 | Gene3D | Cytochrome P450 | 36 | 520 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | CDD | CYP82 | 77 | 524 | - | - | |
| Vimu7g02864 | 532 | PANTHER | CYTOCHROME P450 82C3-RELATED | 25 | 530 | - | - | |
| Vimu7g02864 | 532 | FunFam | Cytochrome P450 82C4 | 34 | 522 | - | - | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 97 | 118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 380 | 398 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | E-class P450 group I signature | 460 | 470 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 463 | 472 | IPR017972 | GO:0005506|GO:0016705 | |
| Vimu7g02864 | 532 | SUPERFAMILY | Cytochrome P450 | 49 | 524 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | PRINTS | P450 superfamily signature | 470 | 481 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu7g02864 | 532 | Pfam | Cytochrome P450 | 45 | 510 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu7g02864 | Vimu-Chr7 | 24184649 | 24187054 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu7g02864 | 43 | 530 | Cytochrome P450 | AT4G31940 | 51.111 | 0.0 | 526 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g02864 | - | - | gmx:100792065 | 970.304 |