Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02863 AGCCTACTCAACATGGCCATTGTCATGATCATGGATGTTTTCCAGCTCCAAACGCTGATTTTAGGCGTTCTTGTCTTGCTTGTAGGTGCCTTGCTTTATCAGTTAAAGAACAAAAATGGTCCTAATGCAAAGATCTGCACTGTGCCTCAAGCAGCAGGAGCATGGCCTATTGTTGGTCATTTGCACCTCTTCGGGGCTAATCAACTTACACACAAGACACTTGGGACGATGGCTGAAAAACATGGACCAATTTTCACAATAAAACTTGGTTCGAACAAAGTTCTGGTGTTGAGTAATTCGGAGATGGCCAAAGAGTGTTTCACTGTCCACGATAAAGCATTCTCCACAAGGCCATGTATTGCAGCAACAAAGCTAATGACATACAATTCAGCAATGTTTGGCTTCGCTGCTCATGGACCCTATTGGCGTGAGATGAGGAAATTTACCACTATCGAGCTTCTCTCTAACCAAAGGCTTGAATTGCTTAAGGATACAAGAACATCTGAGTTAGAGACTGCAACTAGGGAGGTATACAGGTTATGGTCAAGAGAAGGTTGTCCAAAGGAAGGAGTTTTGGTAGACATGAAGCGGTGGTTTGGAGATTTGACGAATAATATTATTCTGAGAATGGTGGGAGGGAAGCCATATTATGGGGCTAATAGTGATGCTTCTGCAGAAGGTGAAGCAGGAAGATATAAGAAAGCTATGAGGGACTTTATGAGTTTATTTGGGGTGTTTGTATTATCCGATGCAATTCCACTTCTGGGGTGGATAGATAACAATGGATACAAAAAGGCTATGAAGAGAACAGCTAGTGAAATAGACACTTTGGTTGAAGGGTGGCTGGAGGAACACAAAAGAAAAAGAAACGCGGGTACAAATGGAAAGGAAGAACAGGATGTCATGGATGTTATGCTTAATGTTCAGCATGATCTTAAGGTTTCTGGCTATGATTCAGACACGATCATCAAGGCTACTTGCCTGAATCTGATCTTGGCAGGAGGAGACAGCATCATGGTGGCTCTAACTTGGGCCCTGTCTCTACTTCTAAACAATGAAACGGAGCTTAAAAAAGCCCAAGAAGAATTGGACACTCATGTTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAAGCTAGTGTACATCCAAGCCATTGTAAAGGAAACCATGCGGCTGTATCCACCAAGTCCTATACTGACCCTTCGTGCAGCAATGGAAGAGTGTACATTTTCATGCGGCTATCATGTTCCTGCTGGCACACATTTGATTGTGAATACTTGGAAGATCCAAAGAGATGGTCGTGTCTGGCATGATCCTCATGATTTCAAACCTGAAAGGTTCTTGACAAGCCACAAAGACGTTGATGTAAAGGGTCAGAACTATGAGTACTTCCCTTTTGGTTCCGGAAGAAGAGCATGTCCGGGGGCCCCACTGGCTCTGCGTGTTGTGCACTTAACCTTGGCTAGACTCTTACACTCTTTCAATGTTGCTTCGCCCTCAAATCAAGCTGTAGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTCTGCTAACTCCACGTTTAGATTCAAAGCTTTACGAAGACTAG 1614 0.4356 SLLNMAIVMIMDVFQLQTLILGVLVLLVGALLYQLKNKNGPNAKICTVPQAAGAWPIVGHLHLFGANQLTHKTLGTMAEKHGPIFTIKLGSNKVLVLSNSEMAKECFTVHDKAFSTRPCIAATKLMTYNSAMFGFAAHGPYWREMRKFTTIELLSNQRLELLKDTRTSELETATREVYRLWSREGCPKEGVLVDMKRWFGDLTNNIILRMVGGKPYYGANSDASAEGEAGRYKKAMRDFMSLFGVFVLSDAIPLLGWIDNNGYKKAMKRTASEIDTLVEGWLEEHKRKRNAGTNGKEEQDVMDVMLNVQHDLKVSGYDSDTIIKATCLNLILAGGDSIMVALTWALSLLLNNETELKKAQEELDTHVGKDRKVEESDIKKLVYIQAIVKETMRLYPPSPILTLRAAMEECTFSCGYHVPAGTHLIVNTWKIQRDGRVWHDPHDFKPERFLTSHKDVDVKGQNYEYFPFGSGRRACPGAPLALRVVHLTLARLLHSFNVASPSNQAVDMTESIGLTNLKATPLEVLLTPRLDSKLYED 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02863 537 SUPERFAMILY Cytochrome P450 54 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Vimu7g02863 537 FunFam Cytochrome P450 82C4 38 527 - -
Vimu7g02863 537 Pfam Cytochrome P450 50 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 CDD CYP82 82 529 - -
Vimu7g02863 537 Gene3D Cytochrome P450 44 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02863 537 PANTHER CYTOCHROME P450 82C3-RELATED 25 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02863 Vimu-Chr7 24170132 24171986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02863 16 535 Cytochrome P450 AT4G31940 50.951 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02863 - - gmx:106794123 927.932