Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02859 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAGCAACAACAACCACAACCGCAGCAGTCTCCTTTTCAACCACAGCAAACTAGTCTGTTCCTTCCGCAGCAGCAGCAGCAGTTTCAACCACAACAACAGCAGCCGCAGCAGCCGCAACAGCAGTTGTTTTTGTTCACTAACGATAAAACACCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGACTCCCAGAAGATTCTCCTTCAGATAGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCGTTTCCAACGATGGCTTTGAGCTTGACGCGGGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGGCATGGAACGACAAAAGACGTTGCTGCAGGAACTGATGTCCACTGTTAAGGAAATGCTACGCAACACAGAGGTTGCTGTTCGATCCTTTATGATACTACGCCCCAGGTTCCTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCGACTATAGCACCTGGCTCAAGTGGCCAACCAATAAATGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCTCCATTTTTACAGCAAACAATTTTAAGATTTGAGAAGTATCTTGGTGAGTGCCATCAGTGGATTGAAGAGTTAGAGCAGCTGCTTCTTTTGGATTCTGAGAGAAATGCTCCCAGTAACGGATCCTCGTTACTACAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTCGAGAGCATTCATCAGTTCATTGAATCTATGAAATCATCATACCTAGCTGATCAGCGTCGCCGGGGGGAGGTGAATGACCCGTTTTTGGAGGCAGATCGGCGAGAAACTGCTAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATCCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGCCTGCCCCACAGACTTCTGCAGCAACTACATCATTGTCATCAGGAAGTGGATTCTCTCTTTTTAGCACACCATCCTCTGCTCCATCGTCTTCTGCATTGTCATCTTTATTTACGACACCAACTCCTGCTCCAGGACCTCAAACCTCACTTTTTGGTTCTGCAACATCTGTACCAGCATCAACTCCCTCTCTGTTCGGTAATACCACTCCATTGTTTAGTTCAACCCCAGCTACAAATTCACTCTTTTCAACTCCATTTGGTTCAGGTACTGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCACGGGCGAAATCCAGAACTGCTCGACGCTGATAAGTGTGATGTCGCATTGAAGGCAAGGGTACGTATCGCGGACATTTGGATGCGGCCCTGTTTCAGTCCATTGAGTTCTTCCATT 1497 0.4709 MSFSLFATPQQQQQPQPQQSPFQPQQTSLFLPQQQQQFQPQQQQPQQPQQQLFLFTNDKTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKTLLQELMSTVKEMLRNTEVAVRSFMILRPRFLHPSGGSSSATAPSQTPGATIAPGSSGQPINASIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNAPSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQFIESMKSSYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQAALPAPQTSAATTSLSSGSGFSLFSTPSSAPSSSALSSLFTTPTPAPGPQTSLFGSATSVPASTPSLFGNTTPLFSSTPATNSLFSTPFGSGTALQQDLGLALDLDRKIHGRNPELLDADKCDVALKARVRIADIWMRPCFSPLSSSI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02859 499 MobiDBLite consensus disorder prediction 305 324 - -
Vimu7g02859 499 MobiDBLite consensus disorder prediction 1 49 - -
Vimu7g02859 499 SUPERFAMILY beta-sandwich domain of Sec23/24 8 73 - -
Vimu7g02859 499 MobiDBLite consensus disorder prediction 169 192 - -
Vimu7g02859 499 Gene3D - 212 302 - -
Vimu7g02859 499 MobiDBLite consensus disorder prediction 305 343 - -
Vimu7g02859 499 Coils Coil 130 150 - -
Vimu7g02859 499 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 439 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Vimu7g02859 499 MobiDBLite consensus disorder prediction 385 408 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02859 52 424 NAC Transcription Factor Family AT4G37130 65.561 4.84e-169 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02859 K14307 - gmx:100776992 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02859 7 24156133 24160228 Vimu7g02859 7 24156133 24160228 ECH