Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02848 ATGGATCGGCCGGCGACCGGAATTGGATTGGACATGCCGATCATGCACGATAGCGACCGTTACGATTTCGTTCGCAATATCGGGTCTGGGAATTTCGGCGTTGCTAGACTTATGAGGGACAAGCAAACGCAAGAGCTTGTTGCCGTCAAGTATATAGAACGTGGAGAAAAGGTTTGTGTTAACTCATCATCTCTCTCTGAAGAAGGAGTCGGCTGCGCTAGACTGATGTTTTTCCTATCATTTACTGTGTTGCAGATTGATCAAAATGTTAAAAGAGAAATAATTAATCACAGGTCTCTAAGACATCCTAACATTATTGGGTTTAAGGAGGTCATTTTAACACCTACCCATCTTGCCATTGTAATGGAATTTGCATCTGGAGGAGAATTATTTGCCCGAATCTGCAATGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGTGTCAGCCACTGTCATGCAATGGAAGTGTGTCACCGGGACTTGAAATTGGAAAATACTTTGTTGGATGGAAGCCCAGCACTCCATTTGAAGATATGTGATTTTGGATATTCCAAGGTTAAGCGATGGAATGATAGATTAGAATTTAGGCTTGAATTCAGAAAAGGCTTAGGCTGGTTCATGCCCCAAAGGGTGGTGGATAAAGTAGAAGTGTTTGAAGCCAAAGTTGCCACATTTGAGGACTCATCTTCAATGCTTCATTCACAACCTAACTCAACCGTAGGAACCCCAGCATATATTGCTCCAGAAGTATTGCTGAAGAAAGAGTATGATGGCAAGGTTGCGGATGTATGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTACAGATCCAAGGAATTCCTGGAAGACAATTCAGAGGGTTCTTGGTGTCCAGTATTCTATTCCAGATGATACAAAAATATCTCCAGAATGTGGCCACCTTATCTCAAGGATATTTGTTTTTGACCCTGCAGAGAGAATCACTATTCGTGAAATATTGAAAAATGAATGGTTTCTGAAAAATCTCCCTCCTTACTTGACGGATGAAAATATCATGGGTAAGCAATTTGTAGAGTCAGATCAGCCTATGCAGAGCATTGATACAATTATGCAGATAATTTCAGAAGCTACCGTACCAGCCGCAGGGACCTATTCTTTAGACCAGTTTTTGACTGATGATATAATAGATGATAACACGGACGAATCAGACTCTGACTTCGAGCAATATGTAGATAGCAGTGGGGAGATAGTGTATGCCATGTAA 1293 0.4161 MDRPATGIGLDMPIMHDSDRYDFVRNIGSGNFGVARLMRDKQTQELVAVKYIERGEKVCVNSSSLSEEGVGCARLMFFLSFTVLQIDQNVKREIINHRSLRHPNIIGFKEVILTPTHLAIVMEFASGGELFARICNAGRFTEDEARFFFQQLISGVSHCHAMEVCHRDLKLENTLLDGSPALHLKICDFGYSKVKRWNDRLEFRLEFRKGLGWFMPQRVVDKVEVFEAKVATFEDSSSMLHSQPNSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGSYPFEDPTDPRNSWKTIQRVLGVQYSIPDDTKISPECGHLISRIFVFDPAERITIREILKNEWFLKNLPPYLTDENIMGKQFVESDQPMQSIDTIMQIISEATVPAAGTYSLDQFLTDDIIDDNTDESDSDFEQYVDSSGEIVYAM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02848 430 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Vimu7g02848 430 PANTHER SERINE/THREONINE KINASE 20 374 - -
Vimu7g02848 430 Pfam Protein kinase domain 21 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02848 430 SMART serkin_6 21 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02848 430 Gene3D Phosphorylase Kinase; domain 1 1 124 - -
Vimu7g02848 430 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Vimu7g02848 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Vimu7g02848 430 ProSiteProfiles Protein kinase domain profile. 21 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02848 430 SUPERFAMILY Protein kinase-like (PK-like) 19 374 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02848 Vimu-Chr7 24084331 24093152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02848 20 352 CBL-interacting serine-threonine protein kinases AT5G25110 36.036 4.36e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vimu7g02848 Pkinase 9.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02848 K14498 - gmx:100783967 602.053