Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02843 ATGCGCTGGTTACCCACCCTCATCTTCTCTCATTCCAATTCATCCTCTTCACCGTCAACTTCACCGCCACCGTCCTCGTCGTCGTCCACGTCCACGTCTTCTTTGGCCACTCGCAAATCCTCCTCTCCCACCTCATCATCCGTGTCCCACGCCAGGAAGCATTCCCGCTCTGCCTGGTTCTTCGGCGGCACCAGAAAGTCGACGCGCTCCAGGAAGCTGAGCCACGTGGAGGACATAGACGCCGTCGTCATCACCCCCTTGTCGCGCTCCACCAGCACCTTCGATCGTTCCTCCGCCCCCTCCTTCGGACCTCAGCCGTTACCCTTGCCCAGAGCCATCGACTCCCGTTTACCCTCCTCCAAAGATGCCGCCACCGAAAAACCCAATGCCGCCGTCGTCTACAAACCCAATGTCGTCGTCGATTTTACCCTCCCCGCTGGTTTTCAAATGCGCAGTGTATTCGCGAGGGAAGAGAATAGAAAAAATATGGAGCACGTGGAGACAAAGTCACCAGGGGTGGCGAGCAGTGGTGCAAGTACAAGTGCTCAAGGAGATAACTTCTGGTTGAGTGCTCCTGCAAGAAGTGCTCCAACAAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACACTGCCAAAACCGATGATTTTGTCCCGTACTATTATGTGTCACCCAAAGCCAACCAGTTCTGGTCAGCACCAGAGATGCCAACATCCGACCCTTCAGCTGGGCACCCACCTCCTGCTTTCTTTGATTTATCAGCACTGCGCACTGATATCACCCTTTCTCCTCCCCATCAAAGCCCGCGGGGAAAAAGCCCCACCCAACACCCCAAAAGCCCCAATGCCCATTCTTCTTCTTCTTCTTCTCCTTCTCCATCCATACACCCCAGATTATCCCTTGACACCTCAATGGCACGTCGGGAAACGACTCCTCCTCACTCTGTCCATCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGGAGCTCCCCTAGTCTCACCTTCTGCTACCTTTTCCCTTCCTGTTGCTAAGACGGAACCCTTGCCAATGAAAAGCCAGTGGCAAAAAGGCAAACTTATTGGCAGAGGTACTTTTGGATCTGTTTATGTTGCCACCAATAGAAAAACTGGAGCACTGTGTGCAATGAAGGAAGCTGAAGCCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGGCAGTTAGAGCAGGAAATTAAAGTTCTTAGTCAACTGAAACATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAGAAGACAAGTTTTATATATATTTGGAATATGTACATCCTGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACCGAATGGGTTCTTCGGAGTTTCACACGCCATATTCTTTCGGGGTTGGCTTACTTACATAGCAAAAAGACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTCGTTAAGCTTGCTGACTTTGGGATGGCCAAACATCTAACTGGACACGTTGCAGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCAGTTGTGCAAAAGGATAATAGCGTTGAAGTAGCTTTTGCTGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTTACGGGAAAGCCTCCTTGGAGCGATTATGAAGGAGCCGCAGCTATGTTTAAGGTTATGACGGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGTGGCATCTCAGCGCTCTACTCGTTCTGCTGTTGAAGTGCCTGCAACACTTTGGATGAGATTTCTGTGTCGGTGTCAAACATGGTGGCTATAG 1851 0.4938 MRWLPTLIFSHSNSSSSPSTSPPPSSSSSTSTSSLATRKSSSPTSSSVSHARKHSRSAWFFGGTRKSTRSRKLSHVEDIDAVVITPLSRSTSTFDRSSAPSFGPQPLPLPRAIDSRLPSSKDAATEKPNAAVVYKPNVVVDFTLPAGFQMRSVFAREENRKNMEHVETKSPGVASSGASTSAQGDNFWLSAPARSAPTSPFASPRIIPNTAKTDDFVPYYYVSPKANQFWSAPEMPTSDPSAGHPPPAFFDLSALRTDITLSPPHQSPRGKSPTQHPKSPNAHSSSSSSPSPSIHPRLSLDTSMARRETTPPHSVHPLPLPPWAGPGAPLVSPSATFSLPVAKTEPLPMKSQWQKGKLIGRGTFGSVYVATNRKTGALCAMKEAEAFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDKFYIYLEYVHPGSMNKYVREHCGAITEWVLRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELMQAVVQKDNSVEVAFAVDIWSLGCTIIEMFTGKPPWSDYEGAAAMFKVMTDTPPIPETLSAEVASQRSTRSAVEVPATLWMRFLCRCQTWWL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02843 616 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 17 587 - -
Vimu7g02843 616 Gene3D Transferase(Phosphotransferase) domain 1 349 604 - -
Vimu7g02843 616 Pfam Protein kinase domain 354 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02843 616 MobiDBLite consensus disorder prediction 162 181 - -
Vimu7g02843 616 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Vimu7g02843 616 ProSiteProfiles Protein kinase domain profile. 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02843 616 MobiDBLite consensus disorder prediction 259 298 - -
Vimu7g02843 616 MobiDBLite consensus disorder prediction 1 54 - -
Vimu7g02843 616 MobiDBLite consensus disorder prediction 90 126 - -
Vimu7g02843 616 MobiDBLite consensus disorder prediction 7 53 - -
Vimu7g02843 616 SUPERFAMILY Protein kinase-like (PK-like) 341 588 IPR011009 -
Vimu7g02843 616 SMART serkin_6 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02843 Vimu-Chr7 24022931 24026908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02843 1 586 MAP Kinase Kinase Kinase AT5G66850 51.876 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vimu7g02843 Pkinase 9.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02843 - - gmx:100793654 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02843 7 24022931 24026908 Vimu7g02843 7 24022931 24026908 PCT