Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02817 CTCTTGCTTTCATCCAGTTATGAGGATGTTGTTTGCTATGTTGAGACCACGAACTTAGATGGGGAGATAAATTTGAAGTTAAAACAAGGGTTAGAGGTAACATCTTCCTTACAGGAGGATCTTAACTTCCAAAAATTTAAAGCTACAGTGAAATGTGAAGACCCCAATGCAAATTTGTATTCATTTGTTGGGAGTATGGAGTTTGAAGAGAAGAATTATGCCCTCTCTCCTCAGCAACTTCTTCTCCGTGACTCTAAACTTCGTAATACAGACTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTCAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGTAGAATTGAGAAGAAGATGGACAAAGCACTAGTACAAAAATCATATTTTATGACGTACAAAAACAAACTATAA 426 0.3638 LLLSSSYEDVVCYVETTNLDGEINLKLKQGLEVTSSLQEDLNFQKFKATVKCEDPNANLYSFVGSMEFEEKNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTQVIQNSTDPPSKRSRIEKKMDKALVQKSYFMTYKNKL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02817 141 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 128 - -
Vimu7g02817 141 SUPERFAMILY Calcium ATPase, transduction domain A 9 108 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02817 Vimu-Chr7 23750606 23751031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02817 1 136 Primary Pumps ATPases AT1G68710 76.471 8.80e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02817 K01530 - gmx:100781421 237.269