Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02804 GGTTTCAACTTTCAACTCGCCCCGCCAATTCCAGTCCTCAAACTCAAAATCCTTAACTATCTGCAATCCCTTCTGCATGATTCGGATCTCGATCCGATTTCCATTTTCGAATCGGCTCCGATAAGCTTCGCTGCCATTGCCTCAGTCAATGGCGTCGAAGCCTTCGCCTTCGCCCTCATCTTCCAGATCGGAGCTTATCATCGATCCTTCCCATTTAGGGAAGCTTATCGAGCATTTATGACTTTCCTGGTTCTTTTGGTTACCGGAGATTATGGTTGTTTTGAGCTGGAGTCTGTTTGCATTGTGTTATATGGTGTAATCGTTTCAATGCAGGGTGAGAAAGTGGACGCTGTGAGTCAGACTGTTAAAGATGTGTTGCCGGTTATTGATTCTTTAAAGAAACAAGTTGCTGTGGAACGGACTGTTTATGTAAAGAATAGAATAGAAGAAAACAGACAGAAACTGGTTGGTGTCACAAATCATGTCTGCAAAATGGCAATGGAGAGAAGGAACAGCAGCGTTGCCGATTCTAACAGAAGTCTAGACCTGCTTACAAAGAGGCAAAAAGATGCAATTGATATGCACAACGGTGTTCATGCAAGTAATGGTGATGTAGAGAGCAATGGCCATCATGAAGATACCCACGGTTCTACAGCAGTTCTTCTAGGGTCTAATGTTGCTGTTAAGAATGCTGTTCGTCCTATCAAATTACCTGAAATTAAAAAATTGCCTCCTTATACTACATGGATATTTCTGGATAGAAATCAAAGAATGACCGAGGATCAATCAGTTGTAGGCCGAAGACGAATTTATTATGATCAAAATGGGGGAGAAGCACTTATATGCAGTGATAGCGAGGAAGAAATTATGGAGGATGAAGAGGAGAAAAGAGAATTCATAGAATCAGAAGATTATATACTTCGCATGACTGTCAAAGAATTCGGTTTAACTGACAACGTTATGGAGTCATTGGCTCAGTGCTTTTCTAGAAACACTAACGAAATTAAGGCAAGGTATGAAGCTCTTAGTATTCAAGACAATGCTGATGGGTCTTCCAAGGCTGTAGATTCTGGAGAGAACTCCCAGAGTGGCAATTCTTTTCTGGAAAAGGATCTGGAAGCCGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGTAGATTACATGGATGTTCACAAGATCTTGTCTTCCCAGCTGAGAAGCAAGCTATATGGATCCCTCCTGATAGTGAAAATGCACCCTGTGGGCCAAATTGTTTCCGATCGGTGCTTAAGTCAGAAAGATTTTCCAAAACATCTTCTGCCCAGGCTGATGGCGAAGATAAGTCCTCTGGTGGTGTTTTATCTAGGAAAAAGTCTTCTGCTAAAAGGCGGTTAAAAGGAAGCCAAAGTGAAAGTGCTTCATCTAACGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGAGATGCTGCTTCAGCATCTCACTCAGCTCCTCCTAAAGCTAAACCCATGGGGAAAGCTGGAACCGGTAAGAGGAACAGTAAGCGAGTGGCAGAACGAGTCTTAGTATGCATGCAGAAAAGGCAGAAGAAAACAGCAGTTTCTGATTCCGATTCCATAAGTGAAGCTCTTGAGCGCTCATCAAATGATATTGTCACTGATCTACATGCTATGAGCAGTGAAGACAACACAAGGAAAGAAGATTCTGTAGATGACAATGTTTGCAAACAAGAAATCACAGACAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTCAATTTCATGGGGAATGGGTTGGTTTAATTTTGTGGTCGGGCTCAAAATGTGCAATTCACTTGGCATATATACTGTCAATGGCCTACCAAGTTACAATTTTTGCTTTTTACTGCAGTTGCTTAATAGCTAGGAATCTCTTAAATGGTCTAAAAACTTGTTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGAAAGATGTCTGGTCCCCCTGGGGATGTTGCAAATTCCCTTTTGGAGGGCTATTCCAAGGTTGATCTAATGCAATTATACTTATTAAGAGGAAGAGTCCGTCGATTGAAGTACACATGGAAATCTGCTGCTTATCATTCCATCAGGAAAAGGATTACAGAGAGAAAGGATCAACCCTGCCGACAGTATAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCTTAATGGAACCTGCTGTGCCCCAAGAGCTGCAAGAATCGGTTTCGTGGTTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCCGCTGATAGGGAATGTGATCCAGATGTCTGTAGGAATTGTTGGGTCAGGTGAGATTTACTTGTTCACGGTTATTTGTGGCGATGGTACTCTTGGGATTCCTAGCCAAAGAGGGGACAATTACGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCGGATGTATCAGGCTGGGGAGCTTTCTTAAAGAATAGTGTTGGTAAACATGAATACCTTGGAGAGTATACAGGAGAGTTGATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATTTGAATGACCAGGCAAGCTTTTACATATATCTATCTATTTTCGTTCTAGATGCTTACCGAAAGGGTGACAAATTGAAGTTTGCGAACCATTCGCCCGATCCAAATTGCTATGCAAAGGTTATAATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCAAAGGAACGGATTTGCGCCGGGGAGGAACTGTTCTATGATTATCGTTATGAGCCTGACAGGGCCCCTGCCTGGGCTCGGAAACCTGAGGCATCTGGATCCAAAAAAGAGGACGGGGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2991 0.4243 GFNFQLAPPIPVLKLKILNYLQSLLHDSDLDPISIFESAPISFAAIASVNGVEAFAFALIFQIGAYHRSFPFREAYRAFMTFLVLLVTGDYGCFELESVCIVLYGVIVSMQGEKVDAVSQTVKDVLPVIDSLKKQVAVERTVYVKNRIEENRQKLVGVTNHVCKMAMERRNSSVADSNRSLDLLTKRQKDAIDMHNGVHASNGDVESNGHHEDTHGSTAVLLGSNVAVKNAVRPIKLPEIKKLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMEDEEEKREFIESEDYILRMTVKEFGLTDNVMESLAQCFSRNTNEIKARYEALSIQDNADGSSKAVDSGENSQSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQAIWIPPDSENAPCGPNCFRSVLKSERFSKTSSAQADGEDKSSGGVLSRKKSSAKRRLKGSQSESASSNAKNISESSDSENGPGRDAASASHSAPPKAKPMGKAGTGKRNSKRVAERVLVCMQKRQKKTAVSDSDSISEALERSSNDIVTDLHAMSSEDNTRKEDSVDDNVCKQEITDNKSWKALEKGLLEKGMEIFGRNSQFHGEWVGLILWSGSKCAIHLAYILSMAYQVTIFAFYCSCLIARNLLNGLKTCWDVFQYINCEEGKMSGPPGDVANSLLEGYSKVDLMQLYLLRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLLNGTCCAPRAARIGFVVVIVLRVNAEVVNVHALPLIGNVIQMSVGIVGSGEIYLFTVICGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQASFYIYLSIFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02804 996 Gene3D SET domain 710 964 IPR046341 -
Vimu7g02804 996 CDD SET_EZH 838 963 - -
Vimu7g02804 996 Coils Coil 283 303 - -
Vimu7g02804 996 Pfam SET domain 849 961 IPR001214 GO:0005515
Vimu7g02804 996 SUPERFAMILY SET domain 731 965 IPR046341 -
Vimu7g02804 996 MobiDBLite consensus disorder prediction 436 519 - -
Vimu7g02804 996 MobiDBLite consensus disorder prediction 971 996 - -
Vimu7g02804 996 MobiDBLite consensus disorder prediction 971 989 - -
Vimu7g02804 996 ProSiteProfiles SET domain profile. 838 962 IPR001214 GO:0005515
Vimu7g02804 996 SMART set_7 838 968 IPR001214 GO:0005515
Vimu7g02804 996 MobiDBLite consensus disorder prediction 466 493 - -
Vimu7g02804 996 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 18 996 IPR025778 GO:0031519
Vimu7g02804 996 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 120 758 IPR045318 GO:0006338|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02804 Vimu-Chr7 23611140 23620658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02804 822 965 C2H2 Transcription Factor Family AT2G23740 26.974 3.48e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vimu7g02804 SET 5.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02804 - K11430 gmx:100809840 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02804 7 23611140 23620658 Vimu7g02804 7 23611140 23620658 ECH