Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02782 ATGGAAGAGCACATCAAGATTATTTCCTTCCTTGTTATCTTCATAGGCATAAAATTAGTATTCTTCAGAAAAAGACAAAAAAACCCACCACCAAGTCCGCCTTCTCTTCCGGTAATAGGCAACCTTCACCAGCTGAAACAGCCGGTACACCGCACCTTCCACGTCCTCTCACAAAAATACGGACCTATTTTCTCTTTCCGGTTCGGCTCACAGCCGGTCCTCGTCGTTTCATCTGCATCCGCCGCCGAAGAATGTTTCACCACAAACGACATCATATTCGCGAATCGTTTCCCTTCTATTAAGACCAAGTTCCTCGGCTACGACAACACCATTCTTTTAGCAGCATCCTACGGCGATCACTGGCGGAACCTGCGACGTATCAGCTCCCTCGAGATCCTCTCCTCTCACCGTCTTAACTCCTTTTCGGGAATCCGAATCGACGAGACTCAGAAGCTGCTCCATAATCTGGCTCGAACCTCCAACAAAGAAGAGTTCACGAGAGTGGAGTTGAGGTCCATGTTCGCTGAACTCACATTCAACACAATCATGAGAATGGTGTGTGGAAAACGCTACTACGGCTCCGAATACGAGGGGACCAACGCTGAGGAGGCTAAGAAGTTCAGAGACCTCATGAATGAGATGGCTCAGTTCGGGTTGGGATCGCACCTCGGAGATTTTGTGCCTGTCTTCAGATGGTTCGATTTTAGCCGTAGCCACAGGAAGTTACGAAAAGTTGGAGAGAAGATGGACGCCCTGTTTCAAGGACTCATTGACGAACATCGGAAAAAAGATCAAGATTCAAACACCATGATAGGACGTATGCTGCATTTACAAGAGTCACAGCCTGAGTATTACACCGACAAAATTATCAAAGGCCTTATAATGGTGTTGATTGTGGCTGGAACAGAGACTTCCGCTATAGCATTAGAGTGGGCCATGTCGAATTTGTTGAACAATCCGGACGTGTTGGAAAAAGCAAGGATTGAATTGGACACCCTGATTGGAGAAGAGTGTTTGATGAAGGAAGAGGATGTAAGCAAATTGAAGTACCTTCAGAATATAATCACTGAGACTCTGCGATTGCATCCTCCAGCGCCAATGCTATTGCCTCATTTCTCCTTCGAAGATTGCACGGTGGGAGGGTATGATGTACCAGGTAACACCATGTTAATGGTGAATGCATGGACCATACATAGGGATCCGGAGCTGTGGGTTGACCCAACAAGCTTCAAGCCGGAGAGGTTTGAGGATGGTCCCATAGACGCAAACAAGCTAATGCCTTTTGGGTTGGGGAGGAGAGCGTGCCCCGGTGCAGCCATGGCACAAAAAACTTTGAACTTGACTTTGGGTTCGTTGATTCAATGCTTTGAATGGGAAAGGATCGGAGAAGAGGAAGTTGACATGACCGAAGGACGGGGAACTCTGGTGCCCAAGGCCATTCCATTGGAGGCCAAATGCAAAACGCGTCCAATCATTAGCAAGATATTCTGA 1491 0.4742 MEEHIKIISFLVIFIGIKLVFFRKRQKNPPPSPPSLPVIGNLHQLKQPVHRTFHVLSQKYGPIFSFRFGSQPVLVVSSASAAEECFTTNDIIFANRFPSIKTKFLGYDNTILLAASYGDHWRNLRRISSLEILSSHRLNSFSGIRIDETQKLLHNLARTSNKEEFTRVELRSMFAELTFNTIMRMVCGKRYYGSEYEGTNAEEAKKFRDLMNEMAQFGLGSHLGDFVPVFRWFDFSRSHRKLRKVGEKMDALFQGLIDEHRKKDQDSNTMIGRMLHLQESQPEYYTDKIIKGLIMVLIVAGTETSAIALEWAMSNLLNNPDVLEKARIELDTLIGEECLMKEEDVSKLKYLQNIITETLRLHPPAPMLLPHFSFEDCTVGGYDVPGNTMLMVNAWTIHRDPELWVDPTSFKPERFEDGPIDANKLMPFGLGRRACPGAAMAQKTLNLTLGSLIQCFEWERIGEEEVDMTEGRGTLVPKAIPLEAKCKTRPIISKIF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02782 496 Gene3D Cytochrome P450 21 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PANTHER CYTOCHROME P450 82C3-RELATED 14 489 - -
Vimu7g02782 496 Pfam Cytochrome P450 30 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 CDD CYP81 61 482 - -
Vimu7g02782 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vimu7g02782 496 FunFam Cytochrome P450 family protein 21 492 - -
Vimu7g02782 496 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02782 496 SUPERFAMILY Cytochrome P450 22 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02782 Vimu-Chr7 23393801 23395357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02782 6 496 Cytochrome P450 AT4G37370 55.131 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02782 K13260 - gmx:100804509 728.013