Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02780 ATGGAATACAACCTTATCAACCTCTTTTACCTTTTCCTTTTTGTCATCACTTTGAAACTGTTGTTCTTCAGAAGGTTGAAAAACCCACCACCAGGTCCACCGTCTCTTCCAATAATCGGCAACCTATATCAGCTGAAAAAACAGCCAGTGCACCGCGCCTTGCACGGCCTCTCACAGAAATACGGTCCTATCCTCTCTCTCCGGTTCGGATCTCAACCCATCCTCGTCGTTTCATCAGCATCTGCTGCGGAAGAATGTTTCACAAAAAACGACATCGTTTTCGCGAATCGTTTTCACTCTACCACGTCCAAGTATCTTGGCTTCAACAACACCATTATCACGGCATCATCGTACGGCGACCACTGGCGCAACTTGCGTCGTATCAGCTCCCTAGAAATCCTCTCTAATCACCGTCTGAACTCGTTTTTGGGAGTACGAAAGGACGAGACCATGAAGTTGCTTCGAAAGATGGTTAGAATCTCTGGTAAAGAAGAATCAGCGAAAGTAGAACTGAGACCCATGTTTGCAGAACTCACGTTCAACATAGTGATTAGAATGGTGTGTGGAAAACGCTACTACGGTGAGGAACACGACGGCACCACCGCTGAGGAGGCTAGGAAGTTCAGAGAGCTCATGGATGAGATATCGCAATTTGGGTTGGGGTCCAACCTCGGAGATTTTGTGCCGCTTTTCAGAATTTTTCGGAGTCACAAAAAGTTACGAAAGGTTGGAGAGAAGCTAGATGCGTTCTTTCAAGGACTCATTGATGAGCATCGGAATAAGAAGGAAAGTTCAAATACCATGATCGATCATTTGCTTTCCTCGCAGAAGTCACAACCTGACTATTACACTGACCAGATAATCAAGGGACTTATTATGGCGTTATATGTGGCTGGAACAGAGACTTCCGCTATAGCATTAGAGTGGGCAATGTCTAATTTGTTGAACCAGCCAGAAATATTGGAGAAATTAAGAATTGAAATCGACATGGAAGTTGGAGAAGAGCGTTTGATAGAGGAAGAAGACGTTCCCAAATTACCATACCTTCAGAATGTTATATCTGAGACTCTAAGATTGCATCCACCACTGCCCATGTTATTGCCCCATTTATCCTCTCAAGATTGCAACGTGGGAGGTTATGACGTGCCACGTAACACTATGTTAATGGTGAATGCATGGGCCATACATAGGGACCCGAAGCTGTGGGCTGACCCGACAAGCTTTAAGCCCGAAAGGTTTCTGAATGACCCAGTGGCTGCACACAAATTAATGCCTTTTGGGTTGGGAAGGAGGGCGTGTCCTGGTGTTGGCATGGCCCAAAGAACTATGGGCTTGACTTTGGGCCTGCTGATTCAATGCTTTGAGTGGAAAAGAGTTGGTGAGGAAGAAATTGACCTCACTGAAGGACGAGGAACTATTGTGGCCAAGGCAATTCCATTGGAGGCCCAATGCAAAGCACGTCCAATCGTTAGCAAGATCTTCTAA 1485 0.4572 MEYNLINLFYLFLFVITLKLLFFRRLKNPPPGPPSLPIIGNLYQLKKQPVHRALHGLSQKYGPILSLRFGSQPILVVSSASAAEECFTKNDIVFANRFHSTTSKYLGFNNTIITASSYGDHWRNLRRISSLEILSNHRLNSFLGVRKDETMKLLRKMVRISGKEESAKVELRPMFAELTFNIVIRMVCGKRYYGEEHDGTTAEEARKFRELMDEISQFGLGSNLGDFVPLFRIFRSHKKLRKVGEKLDAFFQGLIDEHRNKKESSNTMIDHLLSSQKSQPDYYTDQIIKGLIMALYVAGTETSAIALEWAMSNLLNQPEILEKLRIEIDMEVGEERLIEEEDVPKLPYLQNVISETLRLHPPLPMLLPHLSSQDCNVGGYDVPRNTMLMVNAWAIHRDPKLWADPTSFKPERFLNDPVAAHKLMPFGLGRRACPGVGMAQRTMGLTLGLLIQCFEWKRVGEEEIDLTEGRGTIVAKAIPLEAQCKARPIVSKIF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02780 494 Gene3D Cytochrome P450 23 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 PANTHER CYTOCHROME P450 82C3-RELATED 12 487 - -
Vimu7g02780 494 FunFam Cytochrome P450 family protein 22 490 - -
Vimu7g02780 494 CDD CYP81 62 480 - -
Vimu7g02780 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vimu7g02780 494 Pfam Cytochrome P450 30 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g02780 494 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02780 Vimu-Chr7 23384470 23386059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02780 8 494 Cytochrome P450 AT4G37370 53.333 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02780 K13260 - gmx:100804509 817.379