Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02775 ATGGAGGAGCCACGCGAAGTTCGAACTGTTCTGGTTCTCGCCGCCGAGACAGTAGCGAGTGACCACGCTGGCTTCCCTCACTCACCGATGCCTCCACAAGACCACCACCAGCCGCTGTTAGCGGAGGAGCAGCAAGAGACCGCGTACGATTCCGCGGAGAAGGTCGTGGTTGTCGGAATCGACGAGCAGGACGGCGACGTGGAGGCGCCGCCGTTCTCATGGCGGAAGCTGTGGCTGTTCACGGGGCCGGGGTTTCTGATGAGCATCGGGTTTCTGGATCCCGGGAATCTGGAGGGGGATCTTCAGTCTGGTGCCATTGCTGGGTACTCGCTCTTGTGGCTCCTCATGTGGGCCACTGCTATGGGCCTCATTATCCAGCTTCTCTCGGCTCGCCTCGGTGTCGCCACTGGGAGACACTTAGCTGAACTGTGCAGGGAAGAGTATCCTGCATGGGCTAGGATTGTGCTCTGGCTTATGACTGAAATCGCTCTTATTGGCGCTGACATTCAGGAGGTTATTGGGAGCGCTATTGCTATCAGGATTCTCAGTAACGGCGTCGTTCCCCTTTGGGCTGGGGTCGTCGTTACAGCTTTAGATTGGAAGCTGGAGGCATTTTTCGCTGTTCTGATTGCTGTAATGGCTCTCTCGTTTGCGTGGATGTTTGGTGAAGCAAAGCCCAATGGTGTTGATGTTCTTGTTGTAAATTCTGAGGTGTGCTCTTCCGACATATCTGATAAACACTTCAATCTTATATTTGTAGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAACAAGCTGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAATGTGTTTTTGCATTCTGCGCTTGTTCAATCTAGGCAGGTTGACCCCAGCAAGAAAGGCCGTGTTCAGGAAGCTCTTAATTACTACTCGATAGAGTCCACCATCGCCCTTGCGGTGTCCTTTATCATTAATATATTTGTTACAACTGTGTTTGCCAAGGGCTTTTATGGTACTGAAATAGCAAACAACATTGGTCTTGTAAACGCAGGTCAGTACCTTCAGGAGAAGTACGGGGGTGGACTTTTCCCAATCCTGTATATATGGGGTATTGGGTTGTTAGCAGCAGGCCAGAGTAGCACAATTACTGGTACATATGCGGGACAATTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAGTGGGTGAGGGCATTGATTACTCGAAGTTTTGCAATCATCCCAACAATGATAGTTGCTCTTATATTCGATACCTCGGAGGAGTCATTAGATGTTCTGAACGAATGGCTTAATGTTCTCCAGTCAGTTCAAATCCCATTTGCACTCATTCCCTTGCTTTGCTTGGTGTCCAAAGAACAGATAATGGGCAGTTTCAGAATTGGCCCTGTCCTTAAGATTATTTCCTGGCTTGTGGCTGCTCTGGTGATAGTGATAAACGGCTATCTTTTGGTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGTGTTTTCCGCTATAATGTTTGTATTAACAGCTGCATATGTTGCATTCGTACTTTACCTTATTTCACGAGCCATTACCTATACACCATGGCAAAGTTTAACCGGACCTAAGACAGTTGCTACCGCAGAGAATTGA 1635 0.4807 MEEPREVRTVLVLAAETVASDHAGFPHSPMPPQDHHQPLLAEEQQETAYDSAEKVVVVGIDEQDGDVEAPPFSWRKLWLFTGPGFLMSIGFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLIIQLLSARLGVATGRHLAELCREEYPAWARIVLWLMTEIALIGADIQEVIGSAIAIRILSNGVVPLWAGVVVTALDWKLEAFFAVLIAVMALSFAWMFGEAKPNGVDVLVVNSEVCSSDISDKHFNLIFVGILVPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRQVDPSKKGRVQEALNYYSIESTIALAVSFIINIFVTTVFAKGFYGTEIANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSFAIIPTMIVALIFDTSEESLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLKIISWLVAALVIVINGYLLVEFFSSEVNGAVFSAIMFVLTAAYVAFVLYLISRAITYTPWQSLTGPKTVATAEN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02775 544 PRINTS Natural resistance-associated macrophage protein signature 156 182 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 PRINTS Natural resistance-associated macrophage protein signature 268 291 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 PRINTS Natural resistance-associated macrophage protein signature 403 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 PRINTS Natural resistance-associated macrophage protein signature 186 205 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 PRINTS Natural resistance-associated macrophage protein signature 375 394 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 PRINTS Natural resistance-associated macrophage protein signature 437 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 Hamap Divalent metal cation transporter MntH [mntH]. 63 493 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 75 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 NCBIfam Nramp family divalent metal transporter 82 459 - -
Vimu7g02775 544 Pfam Natural resistance-associated macrophage protein 98 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vimu7g02775 544 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 62 522 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02775 Vimu-Chr7 23327188 23331201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02775 30 530 Inorganic Solute Cotransporters AT2G23150 72.222 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02775 K21398 - gmx:100807811 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02775 7 23327188 23331201 Vimu7g02775 7 23327188 23331201 ECH
Vimu7g02775 7 23327188 23331201 Vimu7g02775 7 23327188 23331201 PCT