Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02762 AGTGCTCGAGGTCCAAACCCAATCACACCAGAAATATTGAAACCTGATTTCATTGCTCCTGGTACAAACATATTAGCCGCATTTACGAAATATGCAGGTCCCACAAACCTCGACCAGGATGATAGGCGTGTGGATTTTAACATAATCACAGGAACATCCATGTCATGTCCTCACGCCAGTGGTATAGCAGCTTTGATTAAATCGGTTTATCCAAATTGGAGCCCTGCTGCAATTCGATCTGCGCTAATAACCACAGCTTATGCGTCTTACAACAATGGTGAAAAACTATTAGACAGTGCCACGAATGCTCCTTCAACACCGTTTGCCGTCGGTGCCGGGCATGTGAACCCCATTCTCGCGCTTAATCCAGGACTTGTTTATGATTTAACAGCGGATGATTACCTGAACTTTCTCTGTGCATTAAACTACACACCTGACAGGATTGAAGCTGTGGCAAGGAGAAAGTTCAGCTGTGATGCACAGAAGCACAACAGTGTAACAAGCTTAAATTACCCTTCGTTTGGCGTGGTGTTTAAACCAGTAGCAGGAAGCTCCATTGCAACCATTATTCACGAGCGAACTCTTACCAATGTG 594 0.4478 SARGPNPITPEILKPDFIAPGTNILAAFTKYAGPTNLDQDDRRVDFNIITGTSMSCPHASGIAALIKSVYPNWSPAAIRSALITTAYASYNNGEKLLDSATNAPSTPFAVGAGHVNPILALNPGLVYDLTADDYLNFLCALNYTPDRIEAVARRKFSCDAQKHNSVTSLNYPSFGVVFKPVAGSSIATIIHERTLTNV 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02762 198 Gene3D - 138 198 - -
Vimu7g02762 198 ProSiteProfiles Serine proteases, subtilase domain profile. 1 121 - -
Vimu7g02762 198 ProSitePatterns Serine proteases, subtilase family, serine active site. 51 61 IPR023828 -
Vimu7g02762 198 Gene3D Peptidase S8/S53 domain 1 134 IPR036852 GO:0004252|GO:0006508
Vimu7g02762 198 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 198 IPR045051 -
Vimu7g02762 198 Pfam Subtilase family 1 111 IPR000209 GO:0006508|GO:0008236
Vimu7g02762 198 SUPERFAMILY Subtilisin-like 14 145 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02762 Vimu-Chr7 23235939 23236532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02762 1 198 Subtilisin-like Serine Gene Family AT5G67360 63.636 2.06e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02762 - - gmx:100801866 343.199