Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02744 ATGGGTGAAGAGTTAAAACCTATGGTGTCTGTGAGAGAGTTCGATCCTGATAGAGACAGAGAGAGAGTAGAAGCTGTTGAAAGGATATGTGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACGGACATGCTCGGTGACCCAATTTGCAGGGTTCGCCATTCGCCTGCTTTTCTCATGCTGGTGGCGGAGATTGGTGAAGAGGTAGTAGGAATGATAAGAGGATGCATAAAAACGGTGACATGCGGAAAAAGACTATCCAGGAACGGAAAACACAATGCCAATAACACTAAGCATGTTCCGGTGTACACTAAAGTGGCCTACATACTAGGCCTTCGCGTTTCGCCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTGGTGCACAGGATGGAGGCGTGGTTCAGGGATAATGGAGCCGAGTATTCCTACATGGCAACGGAAAACGACAATTTAGCTTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATTCTTGTCAACCCCGTTTTCGCCCACAGAGCAAGGGTGTCCCCCAAGGTCACAATCATTAGCCTTTCCCCTTCCGATGCTGAGGTTCTCTACCGTCGCCGTTTTGCCACGACGGAGTTCTTTCCCCGCGACATTGACTCCGTCCTGAAGAACAAGCTTAGTCTGGGGACGTTTCTGGCGGTCCCGAGCGGGTCCTACAGTGGCGAGACATGGCCCGGGCCAGATCTTTTCCTGTCGGACCCACCCAAGTCGTGGGCCTTGGTGAGCGTGTGGAACTCTAAGGAGGTGTTCACGCTCGAGGTGCGAGGCGCGTCGCGCGTGAAGCGCACGCTGGCGAAGACGACGAGGGTGGTGGACCGGGCCCTGCCGTGGCTGCGTGTACCGTCGATCCCGGATTTGTTCAGGCCATTCGGGTTTCACTTCATGTACGGGCTTGGAGGGGAAGGCCCAGATGCAGCGAAGATGGTGAAGGCCCTTTGTGGGTTCGCGCACAACCTCGCGATGGAAAAAGGTTGCAGGGTGGTGGCCACGGAAGTATCACCAAACGAGCCCTTACGGTCCGGTATACCCCACTGGAAGATGCTGTCTTGTGACGAAGATTTATGGTGTATGAAGCGGTTGGGTGAGGATTACAGTGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGAATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1221 0.5348 MGEELKPMVSVREFDPDRDRERVEAVERICEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEVVGMIRGCIKTVTCGKRLSRNGKHNANNTKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVHRMEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHRARVSPKVTIISLSPSDAEVLYRRRFATTEFFPRDIDSVLKNKLSLGTFLAVPSGSYSGETWPGPDLFLSDPPKSWALVSVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRVPSIPDLFRPFGFHFMYGLGGEGPDAAKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRSGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02744 406 CDD NAT_SF 60 142 - -
Vimu7g02744 406 Gene3D - 9 173 - -
Vimu7g02744 406 FunFam Probable N-acetyltransferase HLS1-like 18 171 - -
Vimu7g02744 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 406 - -
Vimu7g02744 406 Pfam Acetyltransferase (GNAT) family 54 164 IPR000182 GO:0016747
Vimu7g02744 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016747
Vimu7g02744 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 166 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02744 Vimu-Chr7 23093411 23095194 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu7g02744 Acetyltransf_1 3.3e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02744 - - gmx:100800613 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02744 7 23093411 23095194 Vimu7g02744 7 23093411 23095194 ECH
Vimu7g02744 7 23093411 23095194 Vimu7g02744 7 23093411 23095194 PCT