Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02742 ATGAAAGCTCCTCACTTGAGCTTCTTCTACTTCTACATTCTCTTCCTATCCATACCAGTCAACACTGCAAAAAGGGTCAATAGTACTACCAGCGCTAATGAATCTGGCACAAGAAGAATTCTGCACCAGCCATTGTTCCCGGCGAGTTCGGCACCACCGCCACCACTTCCGGTGGAGAGTCCTCCCTCGCCGGAAGGCGGAAACATCCCCTTCTTCCACGAGTACCCGGCGGGGCCCCCACCGGATCAGAGCCAAGCAGCCCCGTCCAGCTCCAACACTTCAATTGCAAACCCAACTGCAACACAACCCGCAAAGGGAACAAAGAAGGTAGCAATCGCGATCTCAGTGGGGATTGTGACCCTTGGAATGCTATCAGCGTTGGCCTTCTTTTTGTACAAACACAGAGCCAAACACCCGGTGGAGTCTCAAAAACTCGTTGCTGGGAGTGGGAATAACAATAACAATAGCCATATCTCAAACAGAAACGAGGTTGATTCAACTGCGCCACCGTCGAGTTTCCTCTACATTGGGACAGTGGAACCCACGCGAGCCTCTACCAACGACTCGCGAGACAACAGAGATGTTAATAAGGCCAACAGATCGCCGTATCACAAGCTCAAGCGATCCGATCGCTACCGTCCAAGTCCTGAGTTGCAGCCAATGCCGCCGCTCAGTAAGCCTCCCGACGGAAACTACCCGCCGGCGGTCTCCTCCTCATCGGAGTCCGATGAGGAAAGCCGCGGCACGGTGTTTCACTCGCCGCAGAACTCGTCGGTCGATGGATACTACACGCCGGCTTCGCGGCAGAGCTCTCTTGCCAACGGTAGTCCCGCGAAGCGTGACACGAATTCCACGCCCACACCCGTTGTTCCGTTTTCCAAGAGAACTTCGCCCAAGTCACGCGTTTCGGCACCCTCGCCGGAGATACGCCGTGTCATCATTCCGTCTATAAAGCAGCCCCCTCCACCGTCACCGCCGCCACCTAAGCATTCCAGAAAGCCGAAATTTTCGGCGCCTCCCCCACCTCCGAATTTGAAGCATCTTCAGTCAACAACCGACACTGTTTCGCACGTGTCAAAGACTTTACTCAACCCTCCTCCACCACCTCCTCCACCTCCGCCTCCTCCACCGCCGCCGCGAAAATCAGAGTCTCCCGCTGTTAGTGTGTCCTCTACAAATAGGCAGTCTTTGTCACCAATTGAAGGTAGTGTGACAAAAGGTTCAGAAGAGGTTGAACAGAGTGTGAGCTCTTCCGAGAGGCTCGAAGCCAATGACAGGGATGAACCCAAACCAAAATTAAAGGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGTGCTACAGTGTGGGACCAGATAAAATCAAGCTCGTTTCAGTTAAATGAGGACATGATGGAATCGTTGTTTGGATGCAAAGCCACGAATTCTGCCCCAAAAGAACCTCCCAGAAAATCAGTTCTTCCTTCTGTTGATCAGGAGAACAGGGTGTTAGACCCGAAGAAGTCACAGAACATAGCTATACTGCTCAGGGCTTTGAATGTGACCAGAGAGGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTAGGCACTGAACTATTGGAAACACTAGTAAAGATGGCTCCGACTAAAGAGGAAGAGATAAAGCTTAAAAACTACGATGGTGATCTCTCAAAACTGGGATCTGCAGAAAGGTTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTTAAAAGAGTTGAAGCTATGCTCTACAGAGCCAACTTTGATGCAGAAATTAACTACCTTAGAAAGTCTTTTCAAACCATGGAGAAAAGTGATCATTCAGTTGTTAGTATCTTTCAGGCTGCAAGTGGTGAATTAAAGAACAGCCGCCTATTCCTCAAACTCCTTGAAGCTGTTCTAAGGACGGGAAACAGAATGAATGTTGGCACTAATCGAGGGGATGCTAAAGCTTTCAAACTGGAGACACTCTTGAAACTAGTAGATATAAAGGGAACAGATGGAAAAACCACATTGCTCCACTTTGTGGTTCAAGAGATCATTAGATCTGAAGGTGCAGGAGCTGAATCTGCAAATGAGAATGTGAAAATGGATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTGCAGGTTGTGGCAGGGCTTAGTAGAGATCTTAGTAATGTAAAAAAAGCAGCTGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCAAAGCTTGAAACAGGGCTTGATAAAGTGCGATTGGTTTTGCAATATGAAAAGCCAGATGTGCTTGGCAATTTCTTTAACTCTACGAAGCTATTTCTGAAATATGCTGAAGATGAAATTGTAAGGATTAAAGCGGATGAGAGAAAAGCTTTGTACCTTGTAAAAGAAGTCACGGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCCCACCCTCTCAGAATTTTCATGATTGTGAGAGACTTTCTGAGTATTTTGGATCTAGTGTGCAAAGAAGTGGAAAAAATGCATGATAAAATTGTTGGTGGTTCTGGCAGATCTTTCCGAATACCTCCAAATGTATCATTACCTGTTCTCAATAGGTACAGCCATCCAAAGCAGGATAGAAGCTCAGACGAGGAAAGTTCATCCCCCTAG 2646 0.4758 MKAPHLSFFYFYILFLSIPVNTAKRVNSTTSANESGTRRILHQPLFPASSAPPPPLPVESPPSPEGGNIPFFHEYPAGPPPDQSQAAPSSSNTSIANPTATQPAKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVESQKLVAGSGNNNNNSHISNRNEVDSTAPPSSFLYIGTVEPTRASTNDSRDNRDVNKANRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSESDEESRGTVFHSPQNSSVDGYYTPASRQSSLANGSPAKRDTNSTPTPVVPFSKRTSPKSRVSAPSPEIRRVIIPSIKQPPPPSPPPPKHSRKPKFSAPPPPPNLKHLQSTTDTVSHVSKTLLNPPPPPPPPPPPPPPPRKSESPAVSVSSTNRQSLSPIEGSVTKGSEEVEQSVSSSERLEANDRDEPKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPPRKSVLPSVDQENRVLDPKKSQNIAILLRALNVTREEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEINYLRKSFQTMEKSDHSVVSIFQAASGELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAESANENVKMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDVLGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLSILDLVCKEVEKMHDKIVGGSGRSFRIPPNVSLPVLNRYSHPKQDRSSDEESSSP 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02742 881 MobiDBLite consensus disorder prediction 347 361 - -
Vimu7g02742 881 Gene3D Formin, FH2 domain 416 841 IPR042201 -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 145 185 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 413 433 - -
Vimu7g02742 881 SUPERFAMILY Formin homology 2 domain (FH2 domain) 368 840 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 84 104 - -
Vimu7g02742 881 SMART it6_source 423 844 IPR015425 -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 47 64 - -
Vimu7g02742 881 PRINTS Proline rich extensin signature 286 307 - -
Vimu7g02742 881 PRINTS Proline rich extensin signature 321 337 - -
Vimu7g02742 881 PRINTS Proline rich extensin signature 222 238 - -
Vimu7g02742 881 PRINTS Proline rich extensin signature 208 220 - -
Vimu7g02742 881 PRINTS Proline rich extensin signature 365 390 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 384 412 - -
Vimu7g02742 881 Pfam Formin Homology 2 Domain 426 829 IPR015425 -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 216 230 - -
Vimu7g02742 881 PANTHER FORMIN-RELATED 10 875 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vimu7g02742 881 MobiDBLite consensus disorder prediction 186 214 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 232 303 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 44 107 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 316 346 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 861 881 - -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 362 383 - -
Vimu7g02742 881 ProSiteProfiles Formin homology-2 (FH2) domain profile. 423 855 IPR015425 -
Vimu7g02742 881 MobiDBLite consensus disorder prediction 145 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02742 Vimu-Chr7 23062415 23067450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02742 382 871 FH2 protein (formin) Gene Family AT5G67470 68.219 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02742 - - gmx:100806929 1290.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02742 7 23062415 23067450 Vimu7g02742 7 23062415 23067450 ECH
Vimu7g02742 7 23062415 23067450 Vimu7g02742 7 23062415 23067450 PCT