Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02741 ATGACTAACATGGTTAATGGCCATTCTAAGTCTCTTCAAAATGTTAATAAAGTAATTCCTATATCACCTCCTATGCCACGTTCAATATCAATCAATTCATCTTATGATAGTAAGACATCTTATAATTCAAAACCAAGAAGACAAAACAACAACGACTCTTCATCAAAAAAGGATTTATGGGAGCGCCTTTTCTATCAAGGTTATAAAGCAGATGTTTGCATTAACACTAATAGTGGTGTTGTTTATGCTCATTCTAACATTATTTGTGAATGTGAACAAAAACTAGAATTGGGTTTACTCACCATGGATAACTTGGTTGACGTGTTTCAACTAGCATTGTTATGTGATGCTCCAAGACTTAGTCTCATCTGTCATCGCAAGATATTGAAAAACTTCAAAGTTGTTTCAGAGTCAGAAGGATGGAAATCAATGAAATCAAGTCACCCATTTCTAGCAAAGGAAATTATAGAGTCAATGATAAATGAAGAAAATATAAAAAAGGAAAGGATCAGAAAAATGAATGAAAGAAAGGTATATCTACAACTGTACGAAGCCATGGAAGCTCTTGTTCATATATGTAAAGATGGTTGTCGAACTATTGGTCCTTATGACAAAGATCTTCGAGCAAACCAACCATGTAAGTATTCAGCATGCAACGGATTAGAGTTGCTTGTTCGTCATTTTGCTGCATGTAAGTTGAGAGTTCCCGGAGGTTGTGTTCATTGCAAGAGGATGTGGCAATTATTCGAGTTACACTCTCGATTATGTGTTAATCCGAACGATTGTAAAGTTCCTTTATGCAGGAACTTTAAGGAACGAATATCAAAACAAAGCAAGAAAGATGAAATTAGGTGGAAAATATTGGTTGAAAATATCTTGAGAACAAAAGGAATCAATATAGCGTCATGTTTTTTGCGACAATGA 924 0.3452 MTNMVNGHSKSLQNVNKVIPISPPMPRSISINSSYDSKTSYNSKPRRQNNNDSSSKKDLWERLFYQGYKADVCINTNSGVVYAHSNIICECEQKLELGLLTMDNLVDVFQLALLCDAPRLSLICHRKILKNFKVVSESEGWKSMKSSHPFLAKEIIESMINEENIKKERIRKMNERKVYLQLYEAMEALVHICKDGCRTIGPYDKDLRANQPCKYSACNGLELLVRHFAACKLRVPGGCVHCKRMWQLFELHSRLCVNPNDCKVPLCRNFKERISKQSKKDEIRWKILVENILRTKGINIASCFLRQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02741 307 CDD BACK 103 158 - -
Vimu7g02741 307 SMART TAZ_2 176 268 IPR000197 -
Vimu7g02741 307 Coils Coil 156 176 - -
Vimu7g02741 307 Pfam TAZ zinc finger 183 267 IPR000197 -
Vimu7g02741 307 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 90 302 IPR044513 -
Vimu7g02741 307 ProSiteProfiles Zinc finger TAZ-type profile. 173 270 IPR000197 -
Vimu7g02741 307 SUPERFAMILY TAZ domain 176 276 IPR035898 -
Vimu7g02741 307 FunFam BTB/POZ and TAZ domain-containing protein 2 101 171 - -
Vimu7g02741 307 MobiDBLite consensus disorder prediction 32 54 - -
Vimu7g02741 307 Gene3D - 100 173 - -
Vimu7g02741 307 MobiDBLite consensus disorder prediction 32 49 - -
Vimu7g02741 307 FunFam BTB/POZ and TAZ domain-containing protein 2 173 297 - -
Vimu7g02741 307 Gene3D TAZ domain 174 295 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02741 Vimu-Chr7 23055063 23058902 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vimu7g02741 zf-TAZ 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02741 - - var:108334777 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02741 7 23055063 23058902 Vimu7g02741 7 23055063 23058902 ECH