Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g02732 | ATGGGGAAGAAGCAACACAGTAAAGACAGGATGTTCATCACCAAAACGGAGTGGGCAACTGAATGGGGAGGAGCTAAATCCAAAGACAGTCGCACTCCTTTCAAACGTCTTCCCTTCTATTGCTGCGCGCTTACGTTTACACCCTTTGAAGAACCTGTCTGCACTGCTGATGGCAGTGTTTTCGATGTCATGAATATTACTCCCTATATTATAAAATACGGTAAACATCCAGTCACTGGAACTCCTCTCAAGCTGCCGGATCTCATTCCACTAACTTTCCACAAGAATTCAGAAGGAGAATATCATTGTCCAGTGCTAAACAAAGTTTTCACTGAATTTACGCATATTGTGGCAGTGAAGACTACGGGAAACGTGTTCTGCTATGAGGCTGTTAAAGAGTTAAACATTAAGACAAAAAACTGGAAGGAGCTCCTCACTGATGAGCCATTCACAAGGGATGATCTTATAACCATTCAGAATCCTAATGCACTTGACGACAGGGTTCTTCTGGATTTTGATCATGTTAAAAATGATTTGAAAGTTGATGATGAGGAACTACAGAAAATGAGTTCAGATCCAACCTATAACATAAACATGTCGGGTGATATCAAGCAAATGCTTAAGGAGCTTGGAACTGATAAAGGAAAGGAAACTGCAATGCATGGGGGTGGTGGTGGCAAGGCACAAAAAGAAAGGGCTGCTGCACTTGCTGCCATCATAGCTGCAAGGTCCCGTATGGATGAAGATTCCAAATCAAATCCAAATAAAGAGGCCAAAGCTCCTCAGGCATTCAGTATCGTAGATGCTGCATCAGCTGCAGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAGGTGATAAAACTGCTGCTAGGATAGCTATGCACATGTCTGGTGACAGGGCGCCAGTGAATGCAAAGATGGTAAAAAGCCGTTTCACAACTGGTGCTGCTTCCCGGTCTTTTACTTCAACATCATTTGATCCAGTTACAAAAAATGAATTTGAATATGTGAAAGTTGAGAAGAATCCAAAAAAGAAGGGTTATGTACAGCTGCATACGACACATGGTGATTTGAACATTGAGCTACATTGTGATATAACACCTAGGACGTGTGAAAACTTCATCACTCTTTGTGAGCGGGGATTTTATAATGGAGTTGCTTTTCATAGAAGCATAAGGAATTTTATGATACAGGGTGGTGATCCTACTGGTACTGGTCGAGGAGGTGAATCTATATGGGGAAAGCCTTTTAAAGATGAACTTAACTCCAAACTAGTTCACTCTGGAAGAGGTGTAGTAAGCATGGCGAATAGTGGCCCACACACCAATGGTTCCCAATTCTTCATCTTGTACAAGTCTGCAAATCATCTAAACTTCAAACATACAGTTTTTGGAGTAGTTGTAGGTGGCTTGACCACACTTGCTGCCATGGAAAAGGTTCCAGTTGATGATAATGACCGACCTCTGGAGGAAATCAAGATAACAAGTGTCACAATTTTTGTCAATCCTTACACGGAACCAGATGAAGGAGAAGAGCATGATAATGCCACAGAGAAGAATGTAGAGGATGAGGATAATGGTAAGGTAGGCTCATGGTTTAGCAATCCTGGTGCTGGAACATCTGAATCTGGAAGTACGGGGGTCGGTGGTGGTGTCGGCAAGTACTTGAAAGCTAGGAATGCTCAAGCTACATCTGCTAATCTTGATACCAGTACAGCCGTTGTAGGAAAGAAAAGAAAAGTGGGAGTTGCCAGCAGTGACTTTAAAGATTTTTCTGCATGGTAA | 1791 | 0.4249 | MGKKQHSKDRMFITKTEWATEWGGAKSKDSRTPFKRLPFYCCALTFTPFEEPVCTADGSVFDVMNITPYIIKYGKHPVTGTPLKLPDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEPFTRDDLITIQNPNALDDRVLLDFDHVKNDLKVDDEELQKMSSDPTYNINMSGDIKQMLKELGTDKGKETAMHGGGGGKAQKERAAALAAIIAARSRMDEDSKSNPNKEAKAPQAFSIVDAASAAVHGRSAAAAKASSGDKTAARIAMHMSGDRAPVNAKMVKSRFTTGAASRSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCERGFYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGVVVGGLTTLAAMEKVPVDDNDRPLEEIKITSVTIFVNPYTEPDEGEEHDNATEKNVEDEDNGKVGSWFSNPGAGTSESGSTGVGGGVGKYLKARNAQATSANLDTSTAVVGKKRKVGVASSDFKDFSAW | 596 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g02732 | 596 | FunFam | Peptidyl-prolyl cis-trans isomerase 2 | 41 | 96 | - | - | |
Vimu7g02732 | 596 | FunFam | Peptidyl-prolyl cis-trans isomerase cyp65 | 331 | 515 | - | - | |
Vimu7g02732 | 596 | CDD | cyclophilin_RING | 350 | 508 | - | - | |
Vimu7g02732 | 596 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 354 | 501 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | SMART | Ubox_2 | 39 | 101 | IPR003613 | GO:0004842|GO:0016567 | |
Vimu7g02732 | 596 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 344 | 514 | IPR044666 | - | |
Vimu7g02732 | 596 | MobiDBLite | consensus disorder prediction | 535 | 549 | - | - | |
Vimu7g02732 | 596 | Gene3D | - | 331 | 514 | IPR029000 | - | |
Vimu7g02732 | 596 | ProSiteProfiles | U-box domain profile. | 35 | 108 | IPR003613 | GO:0004842|GO:0016567 | |
Vimu7g02732 | 596 | MobiDBLite | consensus disorder prediction | 506 | 551 | - | - | |
Vimu7g02732 | 596 | MobiDBLite | consensus disorder prediction | 508 | 528 | - | - | |
Vimu7g02732 | 596 | CDD | RING-Ubox_PPIL2 | 38 | 110 | IPR026951 | - | |
Vimu7g02732 | 596 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 385 | 402 | IPR020892 | GO:0003755|GO:0006457 | |
Vimu7g02732 | 596 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 40 | 96 | IPR013083 | - | |
Vimu7g02732 | 596 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 364 | 379 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 461 | 476 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 448 | 460 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 433 | 448 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 390 | 402 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 350 | 500 | IPR002130 | GO:0000413|GO:0003755 | |
Vimu7g02732 | 596 | SUPERFAMILY | Cyclophilin-like | 350 | 509 | IPR029000 | - | |
Vimu7g02732 | 596 | SUPERFAMILY | RING/U-box | 37 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g02732 | Vimu-Chr7 | 22996997 | 23005617 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g02732 | 1 | 596 | U-box Gene Family | AT5G67530 | 75.748 | 0.0 | 912 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g02732 | K10598 | - | gmx:100819923 | 1065.45 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu7g02732 | 7 | 22996997 | 23005617 | Vimu7g02732 | 7 | 22996997 | 23005617 | ECH |