Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02730 GACATCAGCAACACCTATTGCACCCAATGGCCTACGCTCTTCGAAGCCCTTGCCACTCGAAACGACGACACTCCCCACCTCCGTCTCACCTCCCTCGTCACCGCCGCCTCCGCGCACAAGGTCATGAAGGAAATCGGCGCCAGAATGGAGAAATTTGCCAGACTCATGGGCGTGCCTTTTCAATTCAACGTCGTTCAGCACTTAGGTCAACTTTCTGACTTCGATTTCGGCGCTTTGGATATCAAAGAGGACGAGGCTTTGGCTATTAACTGTGTCAATACTTTGCATTCGGTCTCCGCCATCGGGAACCACCGTGAAGCAGTGATATCCTCGCTGAGGAGGCTGCAGCCGAGGATCGTGACGGTGGTGGAGGAGGAGGCGGACTTGGAC 390 0.5513 DISNTYCTQWPTLFEALATRNDDTPHLRLTSLVTAASAHKVMKEIGARMEKFARLMGVPFQFNVVQHLGQLSDFDFGALDIKEDEALAINCVNTLHSVSAIGNHREAVISSLRRLQPRIVTVVEEEADLD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02730 130 ProSiteProfiles GRAS family profile. 1 130 IPR005202 -
Vimu7g02730 130 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 126 IPR005202 -
Vimu7g02730 130 Pfam GRAS domain family 1 129 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02730 Vimu-Chr7 22990450 22990841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02730 1 129 GRAS Transcription Factor Family AT4G37650 66.176 1.54e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu7g02730 GRAS 8.5e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02730 - - gmx:100797072 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02730 7 22990450 22990841 Vimu7g02730 7 22990450 22990841 ECH
Vimu7g02730 7 22990450 22990841 Vimu7g02730 7 22990450 22990841 PCT