Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02723 ATGGCTACGGCCACTTCCAAGGCAACCATATCTGTGCCTTTCCTTTCCCATGGCTCCGCTCCTAACTTCCACTTCCTCCATCTTCTATCACCACTCGCAACTGCAACCCTTCCTCGTCGTTCTCGTACTTTCAGGTCACACAACAACAAAACGACAACGTTATCACCGAGAGGCTGCGGCTGTCACCAAAGTCGCGCCGCCGAAGAACACCTCGGCATCTCGGAGGAAGACGAAGAGTTCGTCAATGTTCTTAGGGAATCTCAATCCTACGTTTTGGTTAACAGAGCCAGTGTTTTCGTTGTGCTAATATCTGCAGAAGTTGTTGCCAGTCCTTACTTTGATCCCATTCTCAAGTTTCCTTGCTTGGCGGCTAAAGTTTGGGAGTTTCTTCGCCACCGCCACCGATCACCGGCACGGTGTGAAATCAGTATCTTCTTAATGGCACGTTCCTTATGCCCATCCCTTCCGAACACTTCCACCTTCTCTGATTTCCGCAAACTATGCTCTTCCTCTCACCATTTGTGTTTCCACTCCCCAAAATCAAACCTGCAATTTAAACCTCGTCGGGGCCCAGAAGCGCGGCCTCTGGGTAACCGAAAGAAGGGAAGTTCAAAGAAGTTTACTGCGTCGAGCGAAGGAGCGAATGGTTATGGGAGTATAGAAGCAGAGGGGTATAATGGGTCGGTGGAAGATAAGCAATTCGTGCGTTCCTTTCGCGAGGCCTGGCCTTACTTGTGGGCCTATCGTGGCAGCACCTTCGTTGTCATTATTTCTGGAGAAATTGACATAGCTTTCCTTCATCAGCTAGGTATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGCGATTGACCTTATTATTTTATTCGTAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAAGCATCTCTAGAAGCTGCTATGGAAGCCGCTGGGGGAATAAGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGCGATAATAGTCGATGGCATGAAGTGGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAAAGTTGCTAGACTTGAATCTGACAAAAGCTTGAGTCCTGGATATTTATTAATGATTTATTTTTCCTCCAGCACCTATGAAGTAGCAACAGCTTGTGCCTTGGCTATAGGAGCGGACAAGTTGATATGCCTTATAGATGGTCCAATACTTGATGAGAATGGACGTTTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAAAGGGCTGAGCAAAGTGAAGTAGCTGCTAACTATGTCAAAGTTGTTGATGAAGAAGGTTTCAACTCTCCTGAATATAACAATTTTAATGGAATAGTCAAACCACCACCTATTGGGCGTTTTACAGAATGGCATAAAGCAACCTTCCATAATGGTGTTGGTTTTGAAAATGGAAATGGCTTAGAGTCCAGTGAGCAAGGTTTTGCCATTGGAGGTCAAGAGCGGTTAAGTCGAATGCATGGTTACCTGTCAGAGTTGGCTGCTGCTGCTTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGGATGGGAACAATGGTGGCTAGTTTAGTGGGCATCCTAGTGGATTTCATGCTGGAGCTACCATACAGGCCACAGATGCTGGAAATACGTGGATTGGATCTGAACTCCATCTCTGAGCATTCTCCCTTTTTCTCTTCTATGAAACCATATGTTAAAAATGGCACTCGGACAGCAGAGGTGAAAGATATGTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCCTGTGCGGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGGGAAATTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGGTATGCTATTTTTCTGTGGTTGGTAG 2268 0.4533 MATATSKATISVPFLSHGSAPNFHFLHLLSPLATATLPRRSRTFRSHNNKTTTLSPRGCGCHQSRAAEEHLGISEEDEEFVNVLRESQSYVLVNRASVFVVLISAEVVASPYFDPILKFPCLAAKVWEFLRHRHRSPARCEISIFLMARSLCPSLPNTSTFSDFRKLCSSSHHLCFHSPKSNLQFKPRRGPEARPLGNRKKGSSKKFTASSEGANGYGSIEAEGYNGSVEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIDIAFLHQLGIRFVLVPGTHVQIDKLLNERAIDLIILFVGCQPKYVGRYRITDEASLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCKVARLESDKSLSPGYLLMIYFSSSTYEVATACALAIGADKLICLIDGPILDENGRLIRFLPLQEADMLIRKRAEQSEVAANYVKVVDEEGFNSPEYNNFNGIVKPPPIGRFTEWHKATFHNGVGFENGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASLVGILVDFMLELPYRPQMLEIRGLDLNSISEHSPFFSSMKPYVKNGTRTAEVKDMSGIKQLIQPLEASGILVKRTDEELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEIACIAVSPDCRGQGQGDKLLGMLFFCGW 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02723 755 MobiDBLite consensus disorder prediction 185 213 - -
Vimu7g02723 755 Gene3D - 232 616 IPR036393 -
Vimu7g02723 755 Gene3D - 660 751 - -
Vimu7g02723 755 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 661 755 IPR000182 GO:0016747
Vimu7g02723 755 SUPERFAMILY Carbamate kinase-like 568 615 IPR036393 -
Vimu7g02723 755 CDD AAK_NAGS-ABP 233 614 IPR033719 -
Vimu7g02723 755 SUPERFAMILY Carbamate kinase-like 232 489 IPR036393 -
Vimu7g02723 755 CDD NAT_SF 702 747 - -
Vimu7g02723 755 PANTHER AMINO-ACID ACETYLTRANSFERASE 191 422 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vimu7g02723 755 Pfam Acetyltransferase (GNAT) family 698 748 IPR000182 GO:0016747
Vimu7g02723 755 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 664 749 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02723 Vimu-Chr7 22939643 22946769 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu7g02723 Acetyltransf_1 1.8e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02723 K14682 - gmx:100777694 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02723 7 22939643 22946769 Vimu7g02723 7 22939643 22946769 PCT