Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02709 ATGTTGCTCATTTACGAAGGCACCCAAGAGGAAGCAGCAGAAGCCTATGATATTGCTGCCATTAAATTCAGAGGAGTTAATGCTGTCACTAACTTTGATATAACAAGATATGACGTGGAAAAAATTATGGCAAGCGACAACCTTCTTAGCAGTGAACAAGCCAAGAGGAGCAGAGAGAAGGAGGATGGAACAAGAAACGAGGCCTTCGTTAACCAAAATCCTTGTGCATATGAACACAATAAAGAAACCATTGTAATGCAGAAAAGCTGCAAGATGGTTCCCTATCCCCCCCATCAACAGCTTGACCAGAATCCACCAAGAATCGAGAGTTGCAGAACTCATTCCTTCTCAACTGCTTTAGATAACATATTTCATCAAGAAGTAGAGGAATCGAGTAACATGGGAACACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGCTCAAGAGAAGAGAGCCCAGATAAGACAAGCTTGCCAATGCTCTTTGGAATGCCTTCAACAGTGTCTAAATTATTCACTAACATTCCAACAAGTGACGGGGATTCTTGGGAGCTATCGTCCAATCTCAGGCCAGCTCTTTCTTTGCCTCAGATGCCAATTTTTGCTTCCTGGACCGATGCCTAA 633 0.4281 MLLIYEGTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASDNLLSSEQAKRSREKEDGTRNEAFVNQNPCAYEHNKETIVMQKSCKMVPYPPHQQLDQNPPRIESCRTHSFSTALDNIFHQEVEESSNMGTHLSNPSSLVTSLSSSREESPDKTSLPMLFGMPSTVSKLFTNIPTSDGDSWELSSNLRPALSLPQMPIFASWTDA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02709 210 ProSiteProfiles AP2/ERF domain profile. 1 33 IPR001471 GO:0003700|GO:0006355
Vimu7g02709 210 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 125 - -
Vimu7g02709 210 SUPERFAMILY DNA-binding domain 8 34 IPR016177 GO:0003677
Vimu7g02709 210 Gene3D AP2/ERF domain 5 35 IPR036955 GO:0003700|GO:0006355
Vimu7g02709 210 SMART rav1_2 4 39 IPR001471 GO:0003700|GO:0006355
Vimu7g02709 210 MobiDBLite consensus disorder prediction 131 157 - -
Vimu7g02709 210 MobiDBLite consensus disorder prediction 131 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02709 Vimu-Chr7 22823928 22825332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02709 7 210 AP2-EREBP Transcription Factor Family AT4G37750 35.749 7.81e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02709 K09285 - gmx:100812275 283.878