Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02693 ATGCCTCAGCCATTGTTTCTGTTTTTACTTTTATGTACATTGTTCTCAAGTGGTTTATCCCAAACGGTTTCCCTCCAAAGAGAGTATCGAATTTTACTTGGGGTTAAGAACACCCAGCTTGAAGACAAAAACAAGAGTCTCCAAGACTGGGTACCAAACACAGACCACAACCCCTGCAACTGGACCGGCATTACCTGCGACGCACAAAACCAATCACTTGTCTCCATTGACCTCTCAGAAGTTGGAATCTACGGTGAGTTTCCCTTCGGTTTTTGTCGCATTCACACCCTCCAAAACCTCTCTCTCGCATTCAATTTTCTCTCCAATTCTGTCTCCCCCAACTCCCTGCTCCTCTGTTCCCACCTCCGTCTCTTGAACCTCTCCGACAATTTATTCGTTGGAGACCTGCCGGAATTCACGCCGGAGTTCACCGAACTAAGGGTGTTAGACCTTTCGAAAAACAACTTCACTGGCAACATTCCGGGGAGTTTTGGACAGATTCCTTGTCTGAGAGTTCTCGTTTTATGCGGAAACCTTCTGAGCGGAACCATCCCTCCCTCTTTAGGCAATCTCAGTGAGTTAACTCGTTTGGAACTAGCTTATAACCCCTTCAAACCAGGACCGTTGCCTCCCCAACTAGGAAACCTAATTAATCTTGAAACACTGTTCCTCGCTGCTGTTAACCTCGTAGGGGAAATTCCACCCACTATCGGTAACCTCACCTCGCTCAAAAACTTGGACTTATCAGAAAATGGTTTGTCTGGTAATATCCCAAACAGCATTTCAGGTCTGAAAAACGTTGAACAAATCGAACTATTTGAAAACCAGCTTTCCGGTGAATTACCCCAAGGTTTAGGAAACCTCAGTAGTTTAATTCTCTTGGACCTCTCTCAGAACGCTCTCACCGGGGAACTACCACATGCAATCGCCTCTTTGCGTCTCTATTCTCTCAACCTAAATGACAACCTTCTCGGGGGGGAAATTCCTGAAATTTTAGCTTCAAATCCCAACCTGCATCAGTTGAAACTCTTCAACAACAGCTTCACCGGGAAACTTCCACAAGATCTGGGACAAAACTCAGACATACAGGAATTCGATGTCTCCACGAATGACTTCGTGGGAGAGTTGCCAAAGTACCTCTGCAAGAGAAACAAACTCGAGCGTCTCATCACGTTCGCGAATCGCTTCTCAGGAACGCTCCCTGAGCAATACGGGGAGTGTGATTCACTTCAGTATGTCAGAATCCAGAACAACCAGTTATCAGGCCAGGTGCCTCCAGCTTTTTGGGCCCTTACTGGGCTTCAGTTTCTTGAAATGTCCAACAACAGGTTTGAAGGTTCTGTCTCTGCTTCCATCTCTGCGGCATTCACCAAACTCATTTTGTCTGCTAACAATTTTTCTGGCAAATTCCCAACGCGAATCTGCCAACTCCCTCACCTTCTGGAGATTGACGTCAGCAAGAACCACTTCACCGGTGAAGTTCCCACGTGCATAACTGGGTTAAAAAAGTTACAGAAAGTTAAGATGCAAGAGAACATGTTCACCGGCGAAATACCCAGTAACGTGGCCCTCTGGAAGGACATGACAGAGTTGAACCTGTCATTTAACCGATTTTCCGGTTCAATCCCGCGAGACCTTGGCAGTTTACACGATTTGACAAACCTTGATCTCGCCAGTAATTCTTTAACAGGGGAGATTCCGGTGGAGTTGACGAAACTCAGACTCAACCAGTTCAACGTCTCTGATAACAATCTTTACGGGGAGGTTCCTTCAGGTTTCAACCACCAAATGTACTTTTCCAGTCTAGAGGGAAACCCCGGTCTGTGCAGCGGCGTTATCAAAACCCTACCTCCTTGTTCGAAACGCAGGCCGTTTTCTCTGCTTGCGATTGTCGTTTTAGTTGCCTGCGCTTCCCTCCTTGTGGGGTCCATGTTGTGGTACCTGAAGAGCAAGACGCGCCGTAAATCCAAGCGCTCGTATTTGTCAACCGCGTTTCAGAGGGTTGGGTTCAATGAAGAAGAAATTATTTCAAACTTAACCCGGGAGAACGTGATTGGAGCAGGGAGTTCGGGTCGGGTCTATAGGGTGAGGCTGAAAACGGGGCAGACGGTGGCAGTGAAGAAGCTGTTCGGCGGAGTGCATAAGACTGACACTGAATTGGTGTTCAGGGCGGAGATTGAGACGTTGGGTAGGATTCGGCATGGCAATATTGTGAAACTGTTGTTTTGTTGCAGTGATGATGAGTTTAGGGTATTGGTGTACGAGTACATGGAGAACGGGAGCTTAGGGGATGTGTTGCATGGTGAGGAAATATGTAGGGAGTTGATGGAGTGGTCTAAAAGGTTCGCAATTGCGGTGGGTGCGGCTAAGGGGTTGGCTTATTTGCACCATGATTGTGTGCCGCCAATTGTTCACAGGGACGTGAAGAGTAATAACATTTTGCTGGACCACGAGTTTGTGCCAAGAGTTGCAGACTTTGGCCTCGCTAAGACATTGCAGCTTGAGACAACCCAGGGTGCTGTTATGTCCAAGGTTGCCGGATCATATGGCTACATTGCTCCAGAGTATGGTTATACATTGAAAGTGAACGAGAAGAGCGATGTGTATAGTTTTGGGGTTGTGCTGATGGAATTGATCAGCGGGAAGAGGCCAAATGATTCTTCATTTGGTGAGAACAAGGATGTAGTGAAATGGATGACTGAGATTGTTTTATCAGCGTCTTCTGAAAGAGGAGGTAAAGATTATATTATGACAAAGATTGTGGACCCAAGATTGAACCCAAGCACTTGTGACTATGAAGAGGTTGAGAAGGTTTTAAATGTGGCCCTACTCTGCACCTCAGCATTTCCCATTAATAGACCTTCCATGAGAAGGGTGGTTGAATTGCTCAAGGACCATAAACTGCCATGA 2910 0.4667 MPQPLFLFLLLCTLFSSGLSQTVSLQREYRILLGVKNTQLEDKNKSLQDWVPNTDHNPCNWTGITCDAQNQSLVSIDLSEVGIYGEFPFGFCRIHTLQNLSLAFNFLSNSVSPNSLLLCSHLRLLNLSDNLFVGDLPEFTPEFTELRVLDLSKNNFTGNIPGSFGQIPCLRVLVLCGNLLSGTIPPSLGNLSELTRLELAYNPFKPGPLPPQLGNLINLETLFLAAVNLVGEIPPTIGNLTSLKNLDLSENGLSGNIPNSISGLKNVEQIELFENQLSGELPQGLGNLSSLILLDLSQNALTGELPHAIASLRLYSLNLNDNLLGGEIPEILASNPNLHQLKLFNNSFTGKLPQDLGQNSDIQEFDVSTNDFVGELPKYLCKRNKLERLITFANRFSGTLPEQYGECDSLQYVRIQNNQLSGQVPPAFWALTGLQFLEMSNNRFEGSVSASISAAFTKLILSANNFSGKFPTRICQLPHLLEIDVSKNHFTGEVPTCITGLKKLQKVKMQENMFTGEIPSNVALWKDMTELNLSFNRFSGSIPRDLGSLHDLTNLDLASNSLTGEIPVELTKLRLNQFNVSDNNLYGEVPSGFNHQMYFSSLEGNPGLCSGVIKTLPPCSKRRPFSLLAIVVLVACASLLVGSMLWYLKSKTRRKSKRSYLSTAFQRVGFNEEEIISNLTRENVIGAGSSGRVYRVRLKTGQTVAVKKLFGGVHKTDTELVFRAEIETLGRIRHGNIVKLLFCCSDDEFRVLVYEYMENGSLGDVLHGEEICRELMEWSKRFAIAVGAAKGLAYLHHDCVPPIVHRDVKSNNILLDHEFVPRVADFGLAKTLQLETTQGAVMSKVAGSYGYIAPEYGYTLKVNEKSDVYSFGVVLMELISGKRPNDSSFGENKDVVKWMTEIVLSASSERGGKDYIMTKIVDPRLNPSTCDYEEVEKVLNVALLCTSAFPINRPSMRRVVELLKDHKLP 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02693 969 ProSiteProfiles Protein kinase domain profile. 679 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02693 969 SMART serkin_6 679 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02693 969 SUPERFAMILY RNI-like 352 609 - -
Vimu7g02693 969 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Vimu7g02693 969 FunFam Leucine-rich receptor-like protein kinase family protein 210 307 - -
Vimu7g02693 969 FunFam Leucine-rich repeat receptor-like protein kinase TDR 310 621 - -
Vimu7g02693 969 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Vimu7g02693 969 SUPERFAMILY RNI-like 75 421 - -
Vimu7g02693 969 Gene3D Ribonuclease Inhibitor 293 622 IPR032675 -
Vimu7g02693 969 Pfam Leucine rich repeat 145 203 IPR001611 GO:0005515
Vimu7g02693 969 SUPERFAMILY Protein kinase-like (PK-like) 670 963 IPR011009 -
Vimu7g02693 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Vimu7g02693 969 Gene3D Transferase(Phosphotransferase) domain 1 757 968 - -
Vimu7g02693 969 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Vimu7g02693 969 Gene3D Ribonuclease Inhibitor 180 284 IPR032675 -
Vimu7g02693 969 Gene3D Phosphorylase Kinase; domain 1 662 756 - -
Vimu7g02693 969 FunFam Leucine-rich repeat receptor-like protein kinase 757 968 - -
Vimu7g02693 969 Pfam Protein kinase domain 681 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02693 969 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 194 964 - -
Vimu7g02693 969 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 142 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02693 Vimu-Chr7 22675297 22678332 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02693 23 967 Receptor kinase-like Gene Family AT5G65710 57.364 0.0 1057
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vimu7g02693 Pkinase 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02693 - - gmx:100813889 1543.87