Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02677 ATGGACTCTGCAATCTCTTTTCATGCTTCAAGGCATCTTCCAATCATGGCCATGGTGGACATGGTGGACATGGTGGACATGGTGGCCATGGCCATAACCATAACCAGAGCCAAGCCATTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTCAGATCCTCCGCGCGCTTTCTCTCTCCCTCTCATTCCGATCGCATCCTCTCTCCCTCCAACTCTCTCCGCTTCTCTCCTTCTCATCGCTCCGATTTCCCCGAAACCGCATTCAAGGCCATTTCCGGAGCCTCGGTCAGCGCCAACAGTTCCGTGCCCAAAACCGTGCTCCAGTCCGAGGATGACGACGCCACCGTCAATGGCTTCAGAGGAACGGCTTCCTTCAGCGCTCTCCCTCTGCAGCCTGCTCCCAGAGGAGGAGAAACTGCTCCCTCTGAGAGAGAGCGGAGGGCGTTCTTTCTCTCGGGGCCAATTGAGAGCGGTGCGCTCTCGGGACCCCTCGACGACGCCGTTTCTAGTTCTGGGGGAGTGCCCTTCTCTGCTCCGCTCGGTGGTGGAGTGTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCCGGGTTGAGAAAGGCCTTCCAGCGGAGTCTCTCCGAGAAGAAGCGGCCTTGGGTGGTGCCTGTGGGGCGGAAGGGGAAGACGGAAGCGACGAGTGAGACGGAGAACGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCGGGGGAGGATCGTGTGCATGTCGTTGTATCGGAAGAACAGGGTTGGTTGTTCGTAGGGATATACGACGGTTTCAATGGCCCTGATGCGCCAGAGTTTCTCATGGGTAATCTTTACCGTGCCCTTCACAAGGAGCTCCAGGGTTTGTTTTGGGAACTTGAAGAACCGCAGTCGCAGGTGCAGGGAACTAACCCTGCACCTGAGCTGGATGATAATGAAGCTGAACCCCGGAATGAGGTGGAGGTGGAGGAAGACTCCAGTTGTCTCCCAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGGACTGAAAGTAGGAGGAGAAGGCTGTGGGAGTTTTTGGCTGAGGAGGATGATGCGGAGAACGGGCTCGATCTTTCCGGGTCTGATAGGTTTGCGTTTTCGGTTGATGATGCGCTCAGTGCTAGCAAGGAGGGCTCGGGAGGTAGTAGACGGTGGTTGATTTTGTCTAAGTTGAAGAATGGGTTGTCGAGGCATAAAGAGGGTCACGGGAGGAGGTTGTTGCCGTGGAGCTTGGGCGTGGGGGAGGAGAAGGAGAAGGTTGAAGTGGAAAATCCAACGACGGCAGAGGAGGAGGAGGAGGACGACGAGGAGAAGGGTCACGGTGGGAGGAAGCGAAAAGAGGGGCCTGTGGATCATGAGTTGGTTTTGGGAGCGTTGTCTAGGGCGCTTGAGATGACTGAGCTTGCTTATTTGGATATGACGGATAAGCTGATTGATACCAATCCGGAGCTTGCTCTGATGGGGTCGTGTCTGTTGGCTGTGTTGATGAGGGATGAGGATGTTTATGTTATGAACGTAGGGGATAGCCGCGCCATTGTGGCACATTATGAGTGTGAGGAGGTTCACGCTACTAGTAAGGAAACGGGAAATGGTGGAGGCATTGGGTCAAGCGGGGAGTGCATAGTGGAGGAGTCTTCGGCTCCAGAAGGTGGTGTCGTGTTAGGGAATGAGGGTCCTGCTAGGGAACGGAGGTTGGTTGCGTTGCAGCTGTCCACTGATCACAGCACCAGCATTGAAGAGGAAGTTGTTAGAATTAAGAATGAGCATCCTGATGATAGCCATTGTATTGTGAATGATAGAGTGAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGTGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTGGTGCTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTTCCCTTCATTACGTCACCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGTTTGTATCAATACCTAAGCAATCAAGAAGTGGTTTCTCAGGTCGAGAGCTTTATGGAAAAGTTTCCGGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTACGTGCTGCCAAGAAGGCTGGAATGGATTTCCATGAGTTGCTGGATATACCTCAAGGAGATCGGAGGAAGTATCATGATGATGTGACTGAAGAATCTGGAAGTCATCAGGGAAGTATCCGTGAGAACTTGCTCAACTCAAAGTCGACCCATTTTTTGATGTTCATTCTGGAGAACCGTACATGTCATTGGCAAGAAGCCGCCGGTATAGCTCTATTCAGAATTGGGAGATGCAAAATGATGAGCTTAGGAATGGGCATTGTGGACCGATTTTGGGAAGTCTCTTTAGGAGAAAGAACCATGTAA 2427 0.5183 MDSAISFHASRHLPIMAMVDMVDMVDMVAMAITITRAKPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRFSPSHRSDFPETAFKAISGASVSANSSVPKTVLQSEDDDATVNGFRGTASFSALPLQPAPRGGETAPSERERRAFFLSGPIESGALSGPLDDAVSSSGGVPFSAPLGGGVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPVGRKGKTEATSETENESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEEPQSQVQGTNPAPELDDNEAEPRNEVEVEEDSSCLPGSVKRVTFQAEGTESRRRRLWEFLAEEDDAENGLDLSGSDRFAFSVDDALSASKEGSGGSRRWLILSKLKNGLSRHKEGHGRRLLPWSLGVGEEKEKVEVENPTTAEEEEEDDEEKGHGGRKRKEGPVDHELVLGALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAHYECEEVHATSKETGNGGGIGSSGECIVEESSAPEGGVVLGNEGPARERRLVALQLSTDHSTSIEEEVVRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCFPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTEESGSHQGSIRENLLNSKSTHFLMFILENRTCHWQEAAGIALFRIGRCKMMSLGMGIVDRFWEVSLGERTM 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02677 808 PANTHER PROTEIN PHOSPHATASE 2C 219 712 IPR015655 GO:0004722|GO:0006470
Vimu7g02677 808 Gene3D - 394 738 IPR036457 -
Vimu7g02677 808 SUPERFAMILY PP2C-like 240 737 IPR036457 -
Vimu7g02677 808 MobiDBLite consensus disorder prediction 296 326 - -
Vimu7g02677 808 MobiDBLite consensus disorder prediction 424 457 - -
Vimu7g02677 808 CDD PP2Cc 447 717 IPR001932 -
Vimu7g02677 808 Pfam Protein phosphatase 2C 562 711 IPR001932 -
Vimu7g02677 808 Gene3D - 199 391 IPR036457 -
Vimu7g02677 808 ProSiteProfiles PPM-type phosphatase domain profile. 224 743 IPR001932 -
Vimu7g02677 808 SMART PP2C_4 227 737 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02677 Vimu-Chr7 22533930 22538865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02677 38 737 PP2C-type Phosphatase Gene Family AT2G35350 57.798 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02677 - - gmx:100775371 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02677 7 22533930 22538865 Vimu7g02677 7 22533930 22538865 PCT