Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02662 ATGATTGAGAAATTGACGATATTGAACAGTGAAAAGAGGGCATGGAGCAGACAAAGATCTATGTTAAACCTCCTCACTCACCACTTCTCTTCTCTTCCCTCTCCCTTTCTTCGTGCTTTCTTTGTCTTGGATGAAATAGGAGGAGAAAGTGCACAACTTTGGTTAGAGGAGTTGGTGGGGCATTTTCCTTTCAGCCAAGTCGGAGATCTTGCCTGTGTCTTTGTCTGTTTGCTGTTCTGTGAAGGTTTCGTTTCATTTGCAAATGAGATCTTTACAGTTTATGGTATGAATTGGGAGCTGAGTGACGATGCCAAACCAGCTATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTTCCAAAGGGACTCAGGGTTCTTGTACTTGACGGAGACAGAAGTTCTGCTGCTGAGATAGGAGAACAACTTGAGGCCATGGAGTATCATGGCTATATGCCGCTAAGCATTTTGAAAGCTGGAAGTGGTCCAAATTCCAAAGTTTCTACCTTCTATGACGAGAATGAAGCTTTGTCGGCAGTCTCAAGTAGCCCTGAAGGCTTCCATGTTGCCATAATGGAGGTGAGTACAAGCAGCAGCCTTGGGGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACCATTATGATTTCAAAGAACCAGTGCCTGAACACCACGATGAAGTGCATTGCGCTTGGTGCCGTTGAGTTTCTCATTAAACCACTCTCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTTGTTCACAAGGCCTTTAATTCTAGGGCAAATGGTCTGTCTGAGTCACTAAAACCTGTCAAAGAATCTGTGGAATTAGTGCTGCAGCTTCAAACAGGCAATGAACAAGAAAAAACTCATAAAAGGACGATGTCGATTGATTTAGAGAATGTGTCCAGATTTGGTGATAATGACAATGAGCAATCTGCATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGGACACGGTTATTGGATGATGGAGATTGCCATGAGCAGACTAATTTCTCAATAGAAAAAGAAAGTGGAGAACATGATGGGGAACACAAATCAGTCGAAACTTCATGTGAGAATTTGAATGCTGAAAGTACTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAAGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACTGAATCTACAGAATGAAAAATTTCTCAACAATGCAGATGGTCATACATCTCCAAAAAAGATGGGAGTTCTTAATGATTCATGTGAGATTAAAGCTAGCAGGAAGAAGATGAAAGTAGACTGGACGCCCGAGCTGCATAAAAAATTTGTAAAGGCTGTTGAACAACTAGGTATTGATCAAGCCATTCCTTCTAGAATATTAGAGATAATGAAAGTTGAAGGTTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATGCACAAGAGACAGAGTGCACCTGGGGAAGAAGATCGAAAATGGCATAATCAAAGAGATGCAATGCAAAGGAACTTTTATCTGCAAAGACCAATCATGGCCTACCCTCCCTATCACTCTAATCAAACCCTTTCTCCAGCACCTATATATCCTATGTGGGGACAACCAGGAAGTCAAACAGCTGCTGTACAGATTTGGGGGCCTCCTGCGTACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCGGGGATGCATGTGGATGCTTGGGGATGCCCATTGTTCCCACCTCCTCAAGCTCCTGGTTTTCCCTTCAATCAAAATATACCTGGATTGCACACTCCTAAACCAATGGATTATAGGTTCAGCATGCCGCGTAGCTCCTTTGAGCATCATCCGGCAGAGGAGGTGGTAGACAAGGTTGTGAAGGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTAGGACTCAAAGCTCCTTCCACGGATAGTGTGTTAGCTGAGCTCTCCAAACAAGGCATATCTAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCTGA 2055 0.4365 MIEKLTILNSEKRAWSRQRSMLNLLTHHFSSLPSPFLRAFFVLDEIGGESAQLWLEELVGHFPFSQVGDLACVFVCLLFCEGFVSFANEIFTVYGMNWELSDDAKPAMVCTANDLQGWKDFPKGLRVLVLDGDRSSAAEIGEQLEAMEYHGYMPLSILKAGSGPNSKVSTFYDENEALSAVSSSPEGFHVAIMEVSTSSSLGGFKFLENAKDLPTIMISKNQCLNTTMKCIALGAVEFLIKPLSEDKLKNIWQHVVHKAFNSRANGLSESLKPVKESVELVLQLQTGNEQEKTHKRTMSIDLENVSRFGDNDNEQSACDKYPAPSTPQLKHGTRLLDDGDCHEQTNFSIEKESGEHDGEHKSVETSCENLNAESTPQPTEPEETLIKEEEDFANGSKGERAVSLNLQNEKFLNNADGHTSPKKMGVLNDSCEIKASRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRMHKRQSAPGEEDRKWHNQRDAMQRNFYLQRPIMAYPPYHSNQTLSPAPIYPMWGQPGSQTAAVQIWGPPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFPFNQNIPGLHTPKPMDYRFSMPRSSFEHHPAEEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPC 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02662 684 Gene3D - 125 269 - -
Vimu7g02662 684 MobiDBLite consensus disorder prediction 367 381 - -
Vimu7g02662 684 FunFam Two-component response regulator 435 497 - -
Vimu7g02662 684 SUPERFAMILY CheY-like 123 261 IPR011006 -
Vimu7g02662 684 ProSiteProfiles Response regulatory domain profile. 126 256 IPR001789 GO:0000160
Vimu7g02662 684 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 436 495 IPR017930 -
Vimu7g02662 684 Gene3D - 435 496 - -
Vimu7g02662 684 SUPERFAMILY Homeodomain-like 437 495 IPR009057 -
Vimu7g02662 684 NCBIfam myb-like DNA-binding domain, SHAQKYF class 439 494 IPR006447 GO:0003677
Vimu7g02662 684 PANTHER TRANSCRIPTION ACTIVATOR GLK1 108 672 IPR044825 GO:0003700|GO:0045893
Vimu7g02662 684 MobiDBLite consensus disorder prediction 304 322 - -
Vimu7g02662 684 MobiDBLite consensus disorder prediction 333 366 - -
Vimu7g02662 684 MobiDBLite consensus disorder prediction 304 383 - -
Vimu7g02662 684 Pfam Myb-like DNA-binding domain 442 491 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02662 Vimu-Chr7 22417132 22428729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02662 108 672 Response Regulator Gene Family AT4G18020 47.088 7.41e-134 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Vimu7g02662 Myb_DNA-binding 3.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02662 - - vun:114173738 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02662 7 22417132 22428729 Vimu7g02662 7 22417132 22428729 PCT