Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02622 ATGTTCCTGTTTTTAAATTTCAGTGATAAGTCTCAACTTGAAAGAGTACAAATCCTTGGCAATCATGAATCACCCCTGTGCTCTATAGATTTAAATGATATAGTAAACTACGAAGAGTTTTTGAGAATCTTGACAAATGAAGAGCAACAACAGTTACTGAAGTTACTTCCTGGTGTTGATACTGCTAAACTTCCTGATAGCCTTAAAGTCATGTTCAATAGTTCTCAATTCAAGGAGAACATAACTTATTTTCAGCAGCTTCTTGCTGAAGGGGTTTTTGATATCTCTTTGTTGGGGGCAAAACCCGAAGACTGCAAGACTTTGAAAAGACTTGCAATATCCAATCTGTCGAAGTCAAAATGGGTCGAACACTATAATTTTCTCAAGAAATGTAAAAACAAAGGTGGAAAATTTGATTCTTTTGGATCTGCTGTCACAGCAACAACTAATACTGCAAACAAGAGAACGCGTGACAGCAGAAATCAAAACTTCCCAGAAATGAGGAGCCCAAAAAGAATGATCACAAAGGTTAGCTGTGAGGTGAAAGAGGGTGTAGAAGATGGTGCTTGCTATAGTCCAAAAAGCCTGTTTGCTTTGCCTACTGATGCCAGTTCACTCATGCTTGGTTCTTTGAACTTTGTGGAGGAGATCAGTGAGCAGGATCTGCTGCTAGAGGTGCCATCTAACACTTCTTTTCCTCAGGCAGAGCTCTTGCACCCAAGTGCTAGTAGCAGCTCAGTCTACTCACATCTTATTCATCATTAA 765 0.3948 MFLFLNFSDKSQLERVQILGNHESPLCSIDLNDIVNYEEFLRILTNEEQQQLLKLLPGVDTAKLPDSLKVMFNSSQFKENITYFQQLLAEGVFDISLLGAKPEDCKTLKRLAISNLSKSKWVEHYNFLKKCKNKGGKFDSFGSAVTATTNTANKRTRDSRNQNFPEMRSPKRMITKVSCEVKEGVEDGACYSPKSLFALPTDASSLMLGSLNFVEEISEQDLLLEVPSNTSFPQAELLHPSASSSSVYSHLIHH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02622 254 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 22 134 IPR044867 -
Vimu7g02622 254 Gene3D - 13 119 IPR038108 -
Vimu7g02622 254 Pfam Asx homology domain 15 104 IPR028020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02622 Vimu-Chr7 22138874 22140595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02622 10 239 C2C2-Gata Transcription Factor Family AT4G17570 43.902 5.04e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02622 - - gmx:100803914 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02622 7 22138874 22140595 Vimu7g02622 7 22138874 22140595 PCT