Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02610 TTGATAAGGACGGTCAACATGTGCCGGCAGAATTCTCTGGCGCACCATTCTGGTGAAGAAGAAATTGCAGCTGACGAGAGCCTTTTGGTTTACTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTGAATGGTCCATTGAGACTAACGTCGTTTACTACCTTGTGGATGCTTGCGTGTCTATGTTTTCTTCTTTGATTTCTGGTTCGTTGGAAACTGCATTTTTCAGCCTCTGCCTTCGTTTCTCAGCAGATGTCTGCGTTATAAAATTACAGCAAGGCAGAAAAGGAGGCTCTGAGACCGTGTATCATCTTAGTTGGAATAGTTTTCGTAGCCTATCACTCGCTGAGTTTGAGGCTCTTGACCATGTCACCTCTGGGTTGAGAGCAGGAATAGTGATTTTCAATTATAGGGACCACTACAACATGCTTCGAAAGACAGAAGTGACTGAAGACTTTTCTTGCCCATTTTGCTTGATGCAGTGTGGAAGCTTTAAGGGTTTGCGACTTCATCTATGTTCATCACATGATCTGTTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCAGTGAACGTGTCAGTAAAAGTGGATATATTGAGATCAGAGATGTGGAGGTTATCTAGGTCATATTCTCTACTACTTGTGGTGGATGTAAAATTGGTCACGTATTTGAGTAACATGTATGCGCATTCAAGGCCTCGAAAGCGTAGAAGAAAGGATTCTGTTCAAAATGAAAAGCGCAGCAATGTAAAATTCATGGAGTTGGATTCACCTGAAGACATACAGAATGGATTTATACTAAAGGATGATGGGGAGAATGTGTCTAGAACATCTCGTAATGAGAAGATACTGCTTAGTGGAAGAAATGATGGACGGAAATCTGGTCCTGATCATCCTGGCACCATGGACGACCTGGAGCATGTTGAATCCAGTTTCAACATTTCTGGTGTTTCGATTGCCATGCCTCAATCTTCTGGAGACCCTGAATGTAGTAAATCAATATGTAAAAGTGATCCTGCTCTGCCTGCTAAATCAAAGAAACTAAGCATGGATCGATCGGACTCGAGAAACGTATGCAAACATATCATTACTAATACCATTGGCATCTGTGATAAGCCTATGGCACCAGAACAAGTGTTGTCAGACCGTGATAGTGAAGATGAAGTTGACGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAACTCATGCATCTCTGGAACTCCTTTATGAGGAAGCAAAGGGTGCTGGCGGATGGTCATGTGCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTGGTCACATCTCCAACTTTATTCTGGTGTTGGAGGTTATTCATGATTAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAACAGAACATTAGATAGTTACAGAAACGAGGGATTGGGTACTAGCAAATAA 1500 0.422 MIRTVNMCRQNSLAHHSGEEEIAADESLLVYCKPVELYNILYRREWSIETNVVYYLVDACVSMFSSLISGSLETAFFSLCLRFSADVCVIKLQQGRKGGSETVYHLSWNSFRSLSLAEFEALDHVTSGLRAGIVIFNYRDHYNMLRKTEVTEDFSCPFCLMQCGSFKGLRLHLCSSHDLFNFEFWVTEDYQAVNVSVKVDILRSEMWRLSRSYSLLLVVDVKLVTYLSNMYAHSRPRKRRRKDSVQNEKRSNVKFMELDSPEDIQNGFILKDDGENVSRTSRNEKILLSGRNDGRKSGPDHPGTMDDLEHVESSFNISGVSIAMPQSSGDPECSKSICKSDPALPAKSKKLSMDRSDSRNVCKHIITNTIGICDKPMAPEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELVTSPTLFWCWRLFMIKLWNHGLLDACTMNNCNRTLDSYRNEGLGTSK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02610 499 PANTHER POLYCOMB GROUP PROTEIN 112 493 - -
Vimu7g02610 499 Pfam VEFS-Box of polycomb protein 375 485 IPR019135 -
Vimu7g02610 499 MobiDBLite consensus disorder prediction 280 308 - -
Vimu7g02610 499 CDD ZnB-Zn_EMF2-like 19 201 - -
Vimu7g02610 499 CDD VEFS-box_EMF2-like 376 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02610 Vimu-Chr7 22049759 22058284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02610 129 488 C2H2 Transcription Factor Family AT5G51230 48.760 1.30e-94 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02610 - - gmx:100807112 615.92