Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g02587 | ATGGGTGCCTACAAGTATGTTTCAGAGCTATGGCGCAAGAAGCAGTCTGATGTTATGCGCTTTTTGCAGCGGGTGAGGTGCTGGGAGTACAGGCAGCAGCCTTCCATTGTTCGTTTGACCAGGCCAACCCGCCCTGACAAGGCTCGTCGCTTGGGCTATAAGGCTAAGCAGGGTTACGTTGTGTACCGTGTTCGTGTGCGTAGAGGTGGCAGAAAGAGGCCAGTGCCCAAAGGTATTGTTTATGGTAAGCCAACAAACCAGGGTGTTACTCAATTAAAATTCCAGCGTAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGACGGAAGCTGGGTGGACTTAGGGTCCTAAACTCTTACTGGGTGAACGAGGACTCGACTTACAAGTACTTCGAGATAATTCTGGTAGATGTTGCCCATGCTGCTATTAGAAATGATCCCAGAATCAATTGGCTTTGCAATCCAGTGCATAAGCACAGGGAGCTGCGTGGGCTTACCTCTGCAGGGAAAAGCAACAGGGGTTTACGTGGCAGAGGACATCTGTACCACAAGGCTCGTCCATCCCGCAGGGCAACCTGGAAGAGGAACAACACCCTGTCACTTCGCCGCTACCGTTAA | 615 | 0.5171 | MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHAAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR | 204 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g02587 | 204 | SMART | Ribosomal_L15e_2 | 2 | 193 | IPR000439 | GO:0003735|GO:0005840|GO:0006412 | |
Vimu7g02587 | 204 | PANTHER | RIBOSOMAL PROTEIN L15 | 1 | 204 | IPR000439 | GO:0003735|GO:0005840|GO:0006412 | |
Vimu7g02587 | 204 | Pfam | Ribosomal L15 | 2 | 190 | IPR000439 | GO:0003735|GO:0005840|GO:0006412 | |
Vimu7g02587 | 204 | SUPERFAMILY | Ribosomal proteins S24e, L23 and L15e | 1 | 195 | IPR012678 | GO:0003735|GO:0005840|GO:0006412 | |
Vimu7g02587 | 204 | Gene3D | Ribosomal protein l15e | 1 | 204 | IPR024794 | GO:0003735|GO:0005840 | |
Vimu7g02587 | 204 | FunFam | Ribosomal protein L15 | 1 | 204 | - | - | |
Vimu7g02587 | 204 | ProSitePatterns | Ribosomal protein L15e signature. | 46 | 69 | IPR020925 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g02587 | Vimu-Chr7 | 21915449 | 21917191 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g02587 | 1 | 204 | Cytoplasmic Ribosomal Protein Gene Family | AT4G16720 | 91.667 | 3.90e-127 | 355 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g02587 | K02877 | - | gmx:100305473 | 391.734 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu7g02587 | 7 | 21915449 | 21917191 | Vimu7g02587 | 7 | 21915449 | 21917191 | PCT |