Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02572 ATGGAGCTTCAACTAATTTACCTTTGGTACTCAAATGGAAATTCTGTATTGGGCAGGTTAGAGAAAGTAAACTTAAGCAATCAGTATAGCAAAGTAAAAATCGTGGGAACAGTGCTTTGTGTCTTGGGAGCTCTCACAATGAGCATAATGCAAAGCATTTCGACTGCTGCACCCGAGCAAAATTCAACACTTCCATTATCAAAGACTCCATCAGGTTTTGTCTTTAACACACAAAAGATGATCGGTTGCTTCTATCTCGTGGTTGCAGTCGTGATTTTGTCGAGCAACGTCGTTCTGCAGGCTTTTACTCTTGGAAATTTTCCGGCACCGATGTCCTTGGGTGCAATAACGTCCTTGTTGAGCGCATTCATGACTGCAACCATTCAGGTGCTTGAGAAACACAGGCTGAAAACTGGGCGGCTACTTCTGAGGTCTGGAAATTTAATTGGCTATTTTATTATGGTAATTCCCTTCTCTCATCGTTTCATAGGAATGGCAGGTGCTGTGAGTGGAATATGCCTGAGTTTCAACGGGTGGGCACTGAAGAAAAAAGGGCCAGTTTTTGTCTCCATGTTCAGCCCCATTGGTACAGTGTGCTCTGTCATTTTCGCGGTTATTAAACTTGGAGAAAGTATGAGTACTGGAAGTCTTGGAGGCATGTTTCTCATGTTCACTGGACTCTACTTGGTTCTCTGGGCCAAAGGGGAAGAAGGACTGCCAAATGGAAATAGCTTAGAGAGTGAGTTTGACATAGAGAGGCCTCTTTTGTGTTAA 774 0.4341 MELQLIYLWYSNGNSVLGRLEKVNLSNQYSKVKIVGTVLCVLGALTMSIMQSISTAAPEQNSTLPLSKTPSGFVFNTQKMIGCFYLVVAVVILSSNVVLQAFTLGNFPAPMSLGAITSLLSAFMTATIQVLEKHRLKTGRLLLRSGNLIGYFIMVIPFSHRFIGMAGAVSGICLSFNGWALKKKGPVFVSMFSPIGTVCSVIFAVIKLGESMSTGSLGGMFLMFTGLYLVLWAKGEEGLPNGNSLESEFDIERPLLC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02572 257 PANTHER WAT1-RELATED PROTEIN 20 237 IPR030184 GO:0016020|GO:0022857
Vimu7g02572 257 Pfam EamA-like transporter family 80 231 IPR000620 GO:0016020
Vimu7g02572 257 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02572 Vimu-Chr7 21808097 21809246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02572 20 248 Nodulin-like Gene Family AT5G47470 54.348 6.72e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02572 - - gmx:100814597 310.842