Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02538 TGTTTGTTGTTTGATGCTCAGGCTGAGTTCAACTCAGTTCCTCATTGGCTTCTCATTCTCAAGGAGGAGAAGTTTTTCAGTCGCTGTTTGAATCATGGCTCTGTAAAGAAGAATGAGAAGAACATCTTTTGTTTAGATTGCTGCACGGGCATTTGCCTCCACTGTTTGCCCTTTCATCGCTCTCACGTCCTTCTGCAGATACGAAGATACATGTACAATGATGTATTACGGCTTGGTGATGCTGAAACAGTGTTGAATTGTTCCCTTGTTCAACCGTACACAACAAATAAAACCAAGGTCGTGTTTTTGAAACAGAGGCCTCACACTCGTTCTCACAAAGGCTCTAGCAACATTTGCATCACGTGTGACCGTAACCTTCAAGACCCTTACATCTTCTGCTCCCTGTCTTGCAAGGTGCATCAACATCTTCTACTGATTACCAAAAGCACAGCCATGGAAGGAACTTGGAACAAGTATGAATTCTCTGTGCTACTTGACAAAGAACTAAGCAGGGAGAACGCACAACAGATTGAAGACAGTCAAATCACAACAGATTCAGAACTAGACTCACCCACAGTTTCTAGGTCAACAAGTAGTATCGGTGAGGGTGGTGTGGCAGAGACTGTGAATAATTCACTCAAAAAGAAACGTGGTAATGTTGAAACGGTGCCGGAGATCTGGTACACCGTGGTGAATCGGCGAAAAGGTGTTCCTCATCGATCTCCACTGTACTAA 735 0.4395 CLLFDAQAEFNSVPHWLLILKEEKFFSRCLNHGSVKKNEKNIFCLDCCTGICLHCLPFHRSHVLLQIRRYMYNDVLRLGDAETVLNCSLVQPYTTNKTKVVFLKQRPHTRSHKGSSNICITCDRNLQDPYIFCSLSCKVHQHLLLITKSTAMEGTWNKYEFSVLLDKELSRENAQQIEDSQITTDSELDSPTVSRSTSSIGEGGVAETVNNSLKKKRGNVETVPEIWYTVVNRRKGVPHRSPLY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02538 244 ProSiteProfiles Zinc finger B-box type profile. 24 67 IPR000315 GO:0008270
Vimu7g02538 244 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 243 - -
Vimu7g02538 244 MobiDBLite consensus disorder prediction 175 213 - -
Vimu7g02538 244 Pfam PLATZ transcription factor 68 139 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02538 Vimu-Chr7 21583866 21584880 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu7g02538 PLATZ 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02538 - - vun:114173273 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02538 7 21583866 21584880 Vimu7g02538 7 21583866 21584880 ECH