Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02533 ATGGACAAAAAAGAAAGAAAGGGAGAGTGGAACAGATTGAATTACAGAGCTATCCGAATTTCCGAAGTTGTAAAGGATAACGCAAATTTGATTTGGAAGGGGAAGGAAGTTGCAGTTGCAAGGTGGAGCTTTGGCTTTGCTACCACAAGTGTGAGTGCCGCCGCTGGTTATCGCAGGAGAAGCAACTGCAGGTGGCGCACACCCACAATTTTGTCCGTTGGATGGGACCCCGAAGGCGTGCTTGGCCCACCCCAAACCGGCCACCTCGCCAGGCTCGAGTTTCGAAGACGCCTCGAGAGAGACTCAGAAGCACGCGAAGCCTTCCAGCGTCAAGTCGAAGAAGAGAAAGAACGCCGTCAAACCCTTCGACAATCACGTATTCTTCCCGATACTCCAGAAGAGCTCATTGAGTACTTCCTTGACACTGAAGCTCAGGAGATCGAGTTTGAGATTGCAAGAATGAGACCGCGATTGGATGAAGGATTCTTTGCTCAACTGAAATTCGAGTTAGGACAGCTTCGGTTCGCTGTTAACAAAACAGAGCACATGGAGGAAAGACAGATTGAACTAGAGGCTTTAGAGAAAGCCATACAAGAAGGAATAGAAGCCTACGATAAGATGCAAGGTGAACTCATAAAAGCCAGGGCAAGCCTAACCAAAATCTTGACATCCAAGGATGTTAAAGCAACTTTGCTGGATATGGTTGAAAAGAATGAGATTAATAGATCTTTGTTGGCACTTCTAGATGAAAACATAGCAAATGCACACAAGGGTAACCAGAAAAAGGCTGCAGAATACATGGAGAAGCTTCGGGGTTCTGTTATTAGGTACATAACATTAGACATGGCAATCACAGTGAGGCTTGTTTCACTGCTTCTCATGAACCTCGTAATTTACATGAGCAGCACCGCACAATGTTCCATAACCAAACACGCAGACCCTAACCCTGCAGAGGCAACACGCTACCCTGTTTTATGTGTCCACTCGCTGTTGGCCTACGCAGCCGTCATTCACCGAAGCGACCGCCAACTTGCGATGACAGCTTTGTCGGTGAGCATATCAAGGACCCGATCCTCGGTTTCGTTCCTGAAGAAGATGTCGAAAGCGAGAGGCATGAAGGGTAGGGAGTGGAGAGCGGTGCAAGATTGTGTGGAGACCATCGGTGACAGCGTGGAGCGTCTCAAGCAATCGGTTAGGGAGTTGGGGCGAACGGGTTTGGGTGAAGACTTCGCATGGCACATGAGCAACGTCCAGACATGGGTTAGCGCTGCCTTAACCGACGACAACACTTGTCTCGACGGCTTCGCCGGTTCCTCCATGAACGGAAACGTGAAGAGTGATATAACGGAGAGGGTTATCCACGTTGCTCAAGTCACCAGCAACGCTCTCGCCTTGGTTAATCGCTTTGCTTCCACCCACGCTACTCACTCTCCTTAA 1437 0.4906 MDKKERKGEWNRLNYRAIRISEVVKDNANLIWKGKEVAVARWSFGFATTSVSAAAGYRRRSNCRWRTPTILSVGWDPEGVLGPPQTGHLARLEFRRRLERDSEAREAFQRQVEEEKERRQTLRQSRILPDTPEELIEYFLDTEAQEIEFEIARMRPRLDEGFFAQLKFELGQLRFAVNKTEHMEERQIELEALEKAIQEGIEAYDKMQGELIKARASLTKILTSKDVKATLLDMVEKNEINRSLLALLDENIANAHKGNQKKAAEYMEKLRGSVIRYITLDMAITVRLVSLLLMNLVIYMSSTAQCSITKHADPNPAEATRYPVLCVHSLLAYAAVIHRSDRQLAMTALSVSISRTRSSVSFLKKMSKARGMKGREWRAVQDCVETIGDSVERLKQSVRELGRTGLGEDFAWHMSNVQTWVSAALTDDNTCLDGFAGSSMNGNVKSDITERVIHVAQVTSNALALVNRFASTHATHSP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02533 478 Coils Coil 183 210 - -
Vimu7g02533 478 CDD PMEI-like_3 318 471 - -
Vimu7g02533 478 Coils Coil 98 125 - -
Vimu7g02533 478 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 319 469 IPR035513 -
Vimu7g02533 478 NCBIfam pectinesterase inhibitor domain 318 467 IPR006501 GO:0004857
Vimu7g02533 478 Gene3D Invertase/pectin methylesterase inhibitor family protein 317 469 IPR035513 -
Vimu7g02533 478 FunFam Pectinesterase inhibitor 3 315 470 - -
Vimu7g02533 478 PANTHER DIMETHYLALLYL, ADENOSINE TRNA METHYLTHIOTRANSFERASE 47 279 - -
Vimu7g02533 478 SMART PMEI_2 311 465 IPR006501 GO:0004857
Vimu7g02533 478 Pfam Plant invertase/pectin methylesterase inhibitor 319 465 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02533 Vimu-Chr7 21543632 21548132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02533 319 472 Carbohydrate Esterase AT3G14310 29.677 3.30e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02533 - - gmx:100775621 387.497