Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02502 ATGGAGAAAAGGAAGTACGTGATGGAGCTTGCGTTTCTTCTGGGTCTCATTTTCATGCTTGGCACCAATGCAAGTTCATCTGGCAAAGACCATGGGAACAACTTGCAAACTTACATTGTTCACGTGAAAAGGGTAGAAAGTAGACCTACTCTTGAATCAGAAGAGCTGCATAACTGGTACCACTCCGTCCTTCCAGAAACCTCCAAGAAGGATCGAATGGTTTTCTCTTACCGCAATGTGGCCTCTGGATTTGCCGTGAAGTTAACCCCAGAAGAAGCCAAGGCTCTACTAGAGAAAGATGAGATTGTGTCAGCTCGTCCTGAAAGGACACTTTCTCTGCACACAACACACACTCCATCATTCTTGGGGCTGCGACAAGGAGGAGGATTGTGGAATAGTTCCAACCTTGGCCAAGGCGTCATAATTGGAGTCATAGACACAGGTATATACCCTTTCCATCCATCTTTCAACGATGAAGGGATGCCGCCTCCACCGTCCAAATGGAACGGACACTGTGAATTCACAGGGCAAAGAACCTGCAACAATAAACTAATTGGTGCAAGGAACTTGCTCAAAAGCGCTGCTGAAGAGCCTCCTTTTGAAAACTTCTTCCACGGAACTCACACTTCTGCGGAAGCTGCTGGAAGATTTGTAGAGAACGCTAGTGTTTTTGGCAACGCTCGGGGAACTGCGGCCGGCATGGCGCCTAATGCTCACTTAGCTATGTACAAAGTTTGCAATGATCAAGTAGGATGCACTGAAAGTGCCATCTTAGCCGCAATGGACATAGCCATTGATGATGGTGTTGATGTTCTTTCTCTCTCCCTTGGATTAGGCTCTCTTCCATTCTTTGAAGACCCTATTGCCATCGGTGCATTTGCGGCTATTCAGAACGGAGTTTTTGTTAGTTGCTCAGCCGCAAACTCTGGCCCTGAATATGCCACTCTCTCCAACGAAGCCCCGTGGATCCTCACCGTTGGTGCAAGCACTATTGACAGAAAGATAGCAGCATCGGCAGTACTTGGAAATGGTGCAGAATATACAGGGGAATCTTTGTTCCAACCCCAAGACTTTTCCCCTACACTGTTGCCACTTGTGTATCCTGGTGCAAACGGGAACCTCAGCTCCGGCTTCTGTTTACCTGATTCCTTAGACGACGTCGATGTGGAGGGAAAAGTGGTGGTCTGCGACATAGGTGGAGGATTTCCAAGTGTAGCCAAAGGACAAGTAGTTCTGCACGCTGGTGGCGCTGCCATGATTCTCGCCAACCCAGAAAGTTTGGGCTTCAGCACTTTCGCTGCTGCTCATGTTTTGCCTGCAGTGGAAGTTAGTTACCTTGCTGGGTTGGCCATAAAGTCTTACATAAACTCAACTACCTCACCAAATGCCACAATCTCGTTCCAAGGAACCGTGATTGGTGATGCACTTGCTCCTGCAGTTGTTTCATTTTCTTCAAGGGGTCCAAGCCAGGCTAGTCCTGGGATTCTGAAACCCGACATTATTGGACCAGGAGTCAACATTTTAGCTGCATGGGCTATCTCTGTAGACAACAAATTCCCACCATACAATATTGTTTCAGGAACATCAATGTCTTGTCCTCACCTTAGTGGTATTGCTGCATTACTCAAAAGTGCACACCCTGATTGGTCCCCTGCGGCTATCAAATCAGCAATTATGACCACTGCCCACACACTCAACCTCGGAGGAAAACCCATACTGGACCAGAGGCTTCTTCCTGCTGACATATTTGCCACCGGTGCAGGCCATGTTAACCCTAACAAAGCGAATGATCCGGGGCTTGTTTATGATATCCAGCCAGATGATTACATTCCCTATCTGTGTGGCTTAGGATATGATGATAGAGAAATAGGAATTATTGTGCAAAAGAGAGTGAGATGCAGCGGTGTAACAGTCATACCAGAAGCACAACTGAATTACCCTTCGTTTTCTATTGTGCTGGGGTCAACTACACAGGACTACACCAGAACATTGACGAACGTTGGACCTGCAGAGGCAACTTACGTGGTGGATCTTGAAGTTCCTCTGGCGACGGGGATGAGCGTGAACCCTAGTCAGATAACATTCACGCAGGTGAAGCAGAAGGTTACATTCTCTGTGGAGTTTATCCCAGAGGAAAAGGAAAATAGGGGCAACCATAGTTTTGCTCAGGGTTCTCTTACCTGGATCAGGGTGTCTGACAAACACACCGTCAGAATCCCCATATCGGTTATTTTCGAGTGA 2241 0.4748 MEKRKYVMELAFLLGLIFMLGTNASSSGKDHGNNLQTYIVHVKRVESRPTLESEELHNWYHSVLPETSKKDRMVFSYRNVASGFAVKLTPEEAKALLEKDEIVSARPERTLSLHTTHTPSFLGLRQGGGLWNSSNLGQGVIIGVIDTGIYPFHPSFNDEGMPPPPSKWNGHCEFTGQRTCNNKLIGARNLLKSAAEEPPFENFFHGTHTSAEAAGRFVENASVFGNARGTAAGMAPNAHLAMYKVCNDQVGCTESAILAAMDIAIDDGVDVLSLSLGLGSLPFFEDPIAIGAFAAIQNGVFVSCSAANSGPEYATLSNEAPWILTVGASTIDRKIAASAVLGNGAEYTGESLFQPQDFSPTLLPLVYPGANGNLSSGFCLPDSLDDVDVEGKVVVCDIGGGFPSVAKGQVVLHAGGAAMILANPESLGFSTFAAAHVLPAVEVSYLAGLAIKSYINSTTSPNATISFQGTVIGDALAPAVVSFSSRGPSQASPGILKPDIIGPGVNILAAWAISVDNKFPPYNIVSGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTAHTLNLGGKPILDQRLLPADIFATGAGHVNPNKANDPGLVYDIQPDDYIPYLCGLGYDDREIGIIVQKRVRCSGVTVIPEAQLNYPSFSIVLGSTTQDYTRTLTNVGPAEATYVVDLEVPLATGMSVNPSQITFTQVKQKVTFSVEFIPEEKENRGNHSFAQGSLTWIRVSDKHTVRIPISVIFE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02502 746 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Vimu7g02502 746 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Vimu7g02502 746 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Vimu7g02502 746 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vimu7g02502 746 FunFam subtilisin-like protease SBT1.5 332 472 - -
Vimu7g02502 746 Gene3D - 613 744 - -
Vimu7g02502 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 743 IPR045051 -
Vimu7g02502 746 CDD PA_subtilisin_like 340 465 - -
Vimu7g02502 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Vimu7g02502 746 Pfam Peptidase inhibitor I9 37 114 IPR010259 -
Vimu7g02502 746 SUPERFAMILY Subtilisin-like 113 600 IPR036852 GO:0004252|GO:0006508
Vimu7g02502 746 CDD Peptidases_S8_3 113 563 IPR034197 -
Vimu7g02502 746 Gene3D - 332 472 - -
Vimu7g02502 746 Gene3D Peptidase S8/S53 domain 139 609 IPR036852 GO:0004252|GO:0006508
Vimu7g02502 746 Pfam Fibronectin type-III domain 643 743 IPR041469 -
Vimu7g02502 746 Pfam Subtilase family 137 569 IPR000209 GO:0006508|GO:0008236
Vimu7g02502 746 ProSiteProfiles Serine proteases, subtilase domain profile. 121 596 - -
Vimu7g02502 746 FunFam Subtilisin-like protease SBT1.5 139 361 - -
Vimu7g02502 746 Pfam PA domain 364 451 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02502 Vimu-Chr7 21354252 21356492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02502 12 746 Subtilisin-like Serine Gene Family AT1G04110 43.902 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02502 - - gmx:100783595 1289.63