Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02501 ATGGAACTTGCATTGCCTCTTGCTCTTATTTTCGTGCTAATTAGTGTATGTTCAACAACTTCGGCACACCAAAATCCAGAATTCGCCAAAGCAATAGAGGAACATTATCTTCCAACTGAACAAATCAATGTTCCAAACAGCTTGCTGACTTACATTGTTCGCGTTGGAAAGTCTGATGAGGGCGGTGATTCTCTTCGGTCTAAGGACTTGCTTGCTTGGTACCGTTCGCTCCTTCCATCCAGTTTGGAATCTGATCAGAACCAGCGGCGTGTTATTTTCTCATACCGCAACGTGATGGATGGATTTGCAGTGGAATTGACCCCAGAAGAAGCCGAAGCTCTTGAAGAGAAGGAGGAGGTTGTGTCAGTGCGTCCTGAAAGGACCTATTCATTACACACAACTCACACTCCAACGTTCTTGGGGTTGCAACAGGGACTGGGATTGTGGAGAAATTCTGATTTTGGTAAAGGCATCATAATTGGACTTCTCGACACGGGCATAACCCCTGATCACCCTTCTTTCTCTGATGAAGGAATGCCACTTCCACCGGCAAAATGGAATGGCCTCTGTGAATTCTCAGGACGGAGGACTTGCAACAACAAGCTCATCGGTGCAAGAAATTTTGTCAAGAACTCAAACTCATCCCTTCCGGTGGATAGTTTTGGACATGGGACCCACACAGCCAGCACAGCCGCAGGAAGGTTTGTGCAGGGTGCTAATGTCTTTGGCAATGCCAATGGTACGGCGGTTGGTATGGCACCTGATGCACACTTAGCAATGTACAAGGTATGTGACCTCTCTGGTTGTTTGGAAAGTGCAATACTGGCTGGAATGGACACTGCCATTGAGGATGGCGTGGATGTACTTTCTCTCTCCCTTGGAGGACCCTCTTTTCCTTTCTTTGACGATTCAATTGCACTTGGTGCATTCCGCGCAATTCAGAAGGGAATTTTCGTTAGTTGTTCGGCTGGTAACTCCGGTCCTGATTATGCCACTTTATCTAATGAGGCTCCGTGGATTCTCACCGTTGGCGCAAGCACCATTGACAGAAGAATATTAGCAACAGCGAAACTTGGCAACGGGCAACTGTTCATCGGGGAATCTATTTTCCAACCCCACAACTTCACGCCCACGTTACTACCACTTGTTTATGCAGGTGCAAATGGAAACTCCTCATCGTCGACCTTCTGTGCTCCTGGATCCTTGAAAAACGTGGATGTGACGGGAAAGGTAGTGTTGTGCGAGGTTGGTGGATTCGTTAGAAGTGTAGACAAAGGACAAGAGGTTAAGAACGCTGGTGGAATAGCCATGATCCTCATGAACTCAGTAATTGGAGACTTCAATCCCTTTGCCGAGGTTCATGTTCTTCCTGCTACACACGTAAGCTACCGTGCTGGGTTAGCCATCAAAAGTTACATAAACTCAACTTCAACGCCAACAGCAACAATCTTGTTCGGAGGAACCGCTATTGGAAGCCTCTTTGCGCCTGCAGTTACTTCCTTTTCCTCAAGGGGTCCAAGTTTTGCGAGCCCGGGAATTCTGAAGCCTGACATCATTGGTCCAGGACAGAACATTCTAGCTGCATGGCCCGTGTCTTTGGACAACAATGTTCCTTCGTTCAACATCATTTCAGGCACATCAATGTCTTGTCCTCATCTTGCTGGCATTGCTGCTTTGCTTAAAAACTCTCATCCAGATTGGTCTCCTGCTGCCATAAAATCAGCAATCGTGACGAGTGCTAATACAGTGAACCTTGGAGGGAAGTCCATATTGGATCAAAGGCTTCTACCGGCTGATGTTTTTGCCACAGGAGCTGGACATGTTAACCCTTTGAAGGCCAACGATCCCGGGCTTGTTTATGATCTTCAACCAAATGATTACATTCCTTATTTGTGTGGCTTGAATTACACTGACAAAGAAATTGGACTGATTTTGAACCAAAATGTGGAGTGCTCCGAGGTGAAAACCATACCGGAAGCTCAACTCAATTATCCCTCGTTTTCAATTCAGTTGGGATCAACTCCACAGTTCTACACCAGAACACTCACAAATGTTGGACCCACCAACGTAACCTACTTTTCCGAAATGGACCCACCTTTGGGAGTAGGCATAAGCATAAGCCCTGCTGAGATAACATTCACAGAGGTGAAGCAGAAGGTTACATACACTGTTGGATTTATTCCTGGAGACGTAAAGAATAGAGGGAATCACACGTTTTCTCAAGGTTCTATCAGTTGGGTATCTGGTAAATACTCTGTTACCATCCCTGTAGCTGCTGTTTACCTATGA 2289 0.4626 MELALPLALIFVLISVCSTTSAHQNPEFAKAIEEHYLPTEQINVPNSLLTYIVRVGKSDEGGDSLRSKDLLAWYRSLLPSSLESDQNQRRVIFSYRNVMDGFAVELTPEEAEALEEKEEVVSVRPERTYSLHTTHTPTFLGLQQGLGLWRNSDFGKGIIIGLLDTGITPDHPSFSDEGMPLPPAKWNGLCEFSGRRTCNNKLIGARNFVKNSNSSLPVDSFGHGTHTASTAAGRFVQGANVFGNANGTAVGMAPDAHLAMYKVCDLSGCLESAILAGMDTAIEDGVDVLSLSLGGPSFPFFDDSIALGAFRAIQKGIFVSCSAGNSGPDYATLSNEAPWILTVGASTIDRRILATAKLGNGQLFIGESIFQPHNFTPTLLPLVYAGANGNSSSSTFCAPGSLKNVDVTGKVVLCEVGGFVRSVDKGQEVKNAGGIAMILMNSVIGDFNPFAEVHVLPATHVSYRAGLAIKSYINSTSTPTATILFGGTAIGSLFAPAVTSFSSRGPSFASPGILKPDIIGPGQNILAAWPVSLDNNVPSFNIISGTSMSCPHLAGIAALLKNSHPDWSPAAIKSAIVTSANTVNLGGKSILDQRLLPADVFATGAGHVNPLKANDPGLVYDLQPNDYIPYLCGLNYTDKEIGLILNQNVECSEVKTIPEAQLNYPSFSIQLGSTPQFYTRTLTNVGPTNVTYFSEMDPPLGVGISISPAEITFTEVKQKVTYTVGFIPGDVKNRGNHTFSQGSISWVSGKYSVTIPVAAVYL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02501 762 Pfam Subtilase family 155 583 IPR000209 GO:0006508|GO:0008236
Vimu7g02501 762 Pfam PA domain 381 469 IPR003137 -
Vimu7g02501 762 CDD Peptidases_S8_3 129 581 IPR034197 -
Vimu7g02501 762 SUPERFAMILY PA domain 400 480 IPR046450 -
Vimu7g02501 762 SUPERFAMILY Subtilisin-like 131 618 IPR036852 GO:0004252|GO:0006508
Vimu7g02501 762 Gene3D - 349 490 - -
Vimu7g02501 762 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Vimu7g02501 762 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Vimu7g02501 762 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Vimu7g02501 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 86 758 IPR045051 -
Vimu7g02501 762 FunFam Subtilisin-like protease SBT1.5 157 392 - -
Vimu7g02501 762 Pfam Fibronectin type-III domain 661 758 IPR041469 -
Vimu7g02501 762 CDD PA_subtilisin_like 355 483 - -
Vimu7g02501 762 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Vimu7g02501 762 FunFam subtilisin-like protease SBT1.5 349 490 - -
Vimu7g02501 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 40 132 IPR037045 -
Vimu7g02501 762 Pfam Peptidase inhibitor I9 50 132 IPR010259 -
Vimu7g02501 762 Gene3D Peptidase S8/S53 domain 157 627 IPR036852 GO:0004252|GO:0006508
Vimu7g02501 762 ProSiteProfiles Serine proteases, subtilase domain profile. 128 614 - -
Vimu7g02501 762 Gene3D - 631 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02501 Vimu-Chr7 21349287 21351575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02501 50 748 Subtilisin-like Serine Gene Family AT1G04110 45.516 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02501 - - gmx:100799902 1197.57