Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02463 ATGGTTAGTAACGAGAAGGAGAAAGACCTTGAGTTTTTGTTTGAAGATGTTATAAACGACGTCGCACAAAATGATATTGAAACTGCCAAGTTAGAGAGTGAGAGCAGTAGCAGCGATGACGAGGAAATTCATCAAGTACACTCTCACTCTTTCACTTCTCTCCAATGGCCCCAAAGTTACAAAGAGACTACAGATTCTTATACACTTGCACCAACTCCACATTTTGAATCAATTCTACGAGTACCAAGTATTATACTGTCCAGTTTTGAAAGTCGTTCAAAGCAGAACTCGCAAATAGATGGAAAGACTCCTTTCCTCTCTAGTCCTGAAGTCACTACCCAATCACCATTGTTGAAGGAAGATGCAGCAAAAGGGCATTCAGTAGGCGAATTGCCCGTTAGTCGTGGGTGCAGCTTAATTCAAACAATTTTCAATGCAACTAATGTGATGGCTGGAGTTGGCATTCTCTCAACACCTTATACAATGAAAGAAGCTGGTTGGATTAGCATGGTGTTGATGGTTCTTTTCGCCGTCATTTGCTTCTATACAGCCACCCTTATGAGATACTGCTTTGAAAGCAGAGAAGGAATCAATAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTATCATCATGTTGTGTAGAATTTGTCACCTTGGAAGGAGACAACCTCACTGGACTATTTCCAGGAACATTCTTAGATTTGGGTGGTTTGCATTTAGATTCTGTGCACTTGTTTGGAATTTTTGCTGCACTTATTTTTATCCCAACTGTTTTGCTGAAGGATCTTCGTATAATCTCTGTACTGTCAGCTGGAGGAGTTTTTGCAACACTGTTGATTGTTATCTGTGTGTTTTGTGTTGGGATGATGGATGGTATTGGATTCCATCACAGCACAGAATTCGTCAAGTGGAGTGGCATTCCATTAGCTATTGGTATCCACGGGTTTTGCTTTGCAGGCCATTCAGTTTTTCCTAATATTTACCAATCTATGGCTGACAAAACACAATTTACCAAAGCATTACTTGTATGTTTTGCATTGTCTGTTGCAATATATGGAGGTGTTGCTATCATGGGATTCCTTGAATTTGGCAACGACACTTTGTCTCAAATAACATTAAATTTGCCACGAAATGCATTTGCTTCCCAGGTTGCAATGTGGACAACAGTAAGTACGAGATTTCTGGCAAGAAGTCTGGAGGAGCTGCTACCAGATAGATACTCAAGTAGTAATCGGTGTTTCGTTCTTATCAGAGTTGCACTTGTTGTATCTACAGTTTGTGCCGCTTTTCTGATTCCCTTTTTCGGTTACGTAATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGTCAGTGATATTTCCGAGTTTATGTTTTATGAGAATTGTGGGGAAAAAAGCATCGAAGACACAGGTTGCGCTGAGCGTGGTAATTACTGCATTTGGAGTCATTTTTGGAGTTCTAGGAACATATTCATCTGTGGTGAATATTGTGAACAGTTACTGA 1527 0.4008 MVSNEKEKDLEFLFEDVINDVAQNDIETAKLESESSSSDDEEIHQVHSHSFTSLQWPQSYKETTDSYTLAPTPHFESILRVPSIILSSFESRSKQNSQIDGKTPFLSSPEVTTQSPLLKEDAAKGHSVGELPVSRGCSLIQTIFNATNVMAGVGILSTPYTMKEAGWISMVLMVLFAVICFYTATLMRYCFESREGINSYPDIGEAAFGKYGRIIVSSCCVEFVTLEGDNLTGLFPGTFLDLGGLHLDSVHLFGIFAALIFIPTVLLKDLRIISVLSAGGVFATLLIVICVFCVGMMDGIGFHHSTEFVKWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKTQFTKALLVCFALSVAIYGGVAIMGFLEFGNDTLSQITLNLPRNAFASQVAMWTTVSTRFLARSLEELLPDRYSSSNRCFVLIRVALVVSTVCAAFLIPFFGYVMALIGSLFSILVSVIFPSLCFMRIVGKKASKTQVALSVVITAFGVIFGVLGTYSSVVNIVNSY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02463 508 MobiDBLite consensus disorder prediction 32 47 - -
Vimu7g02463 508 FunFam Amino acid transporter AVT1A 135 507 - -
Vimu7g02463 508 PANTHER OS05G0424000 PROTEIN-RELATED 142 496 - -
Vimu7g02463 508 Gene3D Amino acid/polyamine transporter I 134 507 - -
Vimu7g02463 508 Pfam Transmembrane amino acid transporter protein 137 500 IPR013057 -
Vimu7g02463 508 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02463 Vimu-Chr7 21063180 21067577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02463 3 448 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.579 2.40e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02463 K15015 - gmx:100816368 776.933